RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NAGPAQ9UK23 515 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ZNF510Q9Y2H8 683 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 SH3BP1Q9Y3L3 701 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 NFE2L3Q9Y4A8 694 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
HDGFL3-205ENST00000568129 PRR23AA6NEV1 266 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 YJEFN3A6XGL0 299 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 E7ENQ6 273 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 MED7O43513 233 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ATG13O75143 517 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 FBXO21O94952 628 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ADH1CP00326 375 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 IGLV3-27P01718 113 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 FYNP06241 537 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 CISD3P0C7P0 127 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 CLCN1P35523 988 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 TNFRSF4P43489 277 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ACADSBP45954 432 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 MRPS21P82921 87 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 SATB1Q01826 763 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 APBA1Q02410 837 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 CSTF1Q05048 431 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 GAD2Q05329 585 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ADIGQ0VDE8 80 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 NNTQ13423 1086 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 PPP2R5DQ14738 602 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 TPD52L1Q16890 204 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 HSF5Q4G112 596 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 LY6G5CQ5SRR4 150 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 BSPRYQ5W0U4 402 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 RNF43Q68DV7 783 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 NAIF1Q69YI7 327 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 PKN3Q6P5Z2 889 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 GJB7Q6PEY0 223 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 Q6ZS52 159 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 SYT13Q7L8C5 426 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ASCL5Q7RTU5 278 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 APTXQ7Z2E3 356 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 C12orf40Q86WS4 652 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 TMEM25Q86YD3 366 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 CPXM2Q8N436 756 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 SECISBP2LQ93073 1101 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 AZIN2Q96A70 460 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 P2RY11Q96G91 374 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 BPIFA3Q9BQP9 254 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 EPC1Q9H2F5 836 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 LRRC4Q9HBW1 653 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ABCC13Q9NSE7 274 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 C2orf42Q9NWW7 574 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 LIMA1Q9UHB6 759 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 CYTH4Q9UIA0 394 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 AJAP1Q9UKB5 411 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 HBS1LQ9Y450 684 aaKnown RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 DAAM1Q9Y4D1 1078 aa8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 ZFHX2Q9C0A1 2572 aaPredicted RBP8.58□□□□□ -1.04
HDGFL3-205ENST00000568129 PI4KAP42356 2102 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 THADAQ6YHU6 1953 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 EP300Q09472 2414 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 MDM4O15151 490 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CACNG3O60359 315 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 LATS1O95835 1130 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 PENKP01210 267 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CALCAP01258 141 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 C7P10643 843 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 ADH5P11766 374 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 GNA15P30679 374 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CDH5P33151 784 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CNR2P34972 360 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CHKAP35790 457 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 GRIA2P42262 883 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 KIR2DL1P43626 348 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC6A11P48066 632 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 RING1Q06587 406 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 GOLGA8FQ08AF8 430 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 GOLGA8DPQ0D2H9 430 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 MESP2Q0VG99 397 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 KRT31Q15323 416 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 STX1AQ16623 288 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 PREPLQ4J6C6 727 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 C10orf120Q5SQS8 335 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 SASS6Q6UVJ0 657 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 C11orf57Q6ZUT1 292 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CAMKK1Q8N5S9 505 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 NDRG1Q92597 394 aaKnown RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 NKD2Q969F2 451 aaPredicted RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 PNKPQ96T60 521 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 FUCA2Q9BTY2 467 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 STK33Q9BYT3 514 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 ACP6Q9NPH0 428 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms