RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 BECN1Q14457 450 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 CBWD6Q4V339 395 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 CBWD3Q5JTY5 395 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 CBWD5Q5RIA9 395 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 STPG1Q5TH74 334 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TCERG1LQ5VWI1 586 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 ANKRD40Q6AI12 368 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 GRAMD4Q6IC98 578 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TCEAL6Q6IPX3 200 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TRMT11Q7Z4G4 463 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TADA2BQ86TJ2 420 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 SPATA20Q8TB22 786 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TATDN2Q93075 761 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 TCEAL3Q969E4 200 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 XPO6Q96QU8 1125 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 BBS2Q9BXC9 721 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 DNAJC17Q9NVM6 304 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 CLIC5Q9NZA1 410 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 BCCIPQ9P287 314 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 WDR35Q9P2L0 1181 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 COQ4Q9Y3A0 265 aa15.84■□□□□ 0.13
SCAMP2-209ENST00000567638 PI4KAP42356 2102 aa15.83■□□□□ 0.13
SCAMP2-209ENST00000567638 TCRBV21S2A2A0A5A6 115 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 TRIM24O15164 1050 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 STC2O76061 302 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 CAVIN2O95810 425 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 RALAP11233 206 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 TYRP14679 529 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 PMS1P54277 932 aaKnown RBP15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 NUCB2P80303 420 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 ARHGAP17Q68EM7 881 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 Q6ZNB5 142 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 TPGS1Q6ZTW0 290 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 HMGB4Q8WW32 186 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 RLN3Q8WXF3 142 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 ERCC4Q92889 916 aaPredicted RBP15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 SMARCE1Q969G3 411 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 SPACA7Q96KW9 195 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 CDK5RAP1Q96SZ6 601 aaKnown RBP15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 UBXN6Q9BZV1 441 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 HCN2Q9UL51 889 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 STARD13Q9Y3M8 1113 aa15.83■□□□□ 0.12
SCAMP2-209ENST00000567638 TRIM49BA6NDI0 452 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 TM4SF5O14894 197 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 RAB41Q5JT25 222 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 EGFLAMQ63HQ2 1017 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 RNF43Q68DV7 783 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 CYP2U1Q7Z449 544 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 PIGZQ86VD9 579 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 MIB1Q86YT6 1006 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 ANKRD52Q8NB46 1076 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 SLC35C1Q96A29 364 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 TIGD1Q96MW7 591 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 EDEM2Q9BV94 578 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 GTPBP4Q9BZE4 634 aaKnown RBP15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 RASAL2Q9UJF2 1139 aa15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 CNOT1A5YKK6 2376 aaKnown RBP15.82■□□□□ 0.12
SCAMP2-209ENST00000567638 HOXB2P14652 356 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 NTSR1P30989 418 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 DHPSP49366 369 aaPredicted RBP15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 DGKGP49619 791 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 SLC8A3P57103 927 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 COG7P83436 770 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 CUL2Q13617 745 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 BYSLQ13895 437 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 TOGARAM2Q6ZUX3 1019 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 LPCAT2Q7L5N7 544 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 PGBD3Q8N328 593 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 ARHGAP18Q8N392 663 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 ADAMTS9Q9P2N4 1935 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 ARMCX3Q9UH62 379 aaPredicted RBP15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 HOOK1Q9UJC3 728 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
SCAMP2-209ENST00000567638 CKAP5Q14008 2032 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 PRRT4C9JH25 899 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 PSMA7O14818 248 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 KHNYNO15037 678 aaKnown RBP15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 KLKB1P03952 638 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 GABRG2P18507 467 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 KCNA4P22459 653 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 WASP42768 502 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 TKTL1P51854 596 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 BCAT1P54687 386 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 YWHAGP61981 247 aaKnown RBP eCLIP15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 YWHAEP62258 255 aaKnown RBP15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 EFEMP1Q12805 493 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 GOLGA7BQ2TAP0 167 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 FRMD1Q8N878 549 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 ACOX2Q99424 681 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 PLK2Q9NYY3 685 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 MBD1Q9UIS9 605 aaPredicted RBP15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 TSPAN16Q9UKR8 245 aa15.8■□□□□ 0.12
SCAMP2-209ENST00000567638 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.79■□□□□ 0.12
SCAMP2-209ENST00000567638 A0A1W2PQF6 199 aa15.79■□□□□ 0.12
SCAMP2-209ENST00000567638 PATE3B3GLJ2 98 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms