RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 C1orf210Q8IVY1 113 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 SYNPOQ8N3V7 929 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 ZNF276Q8N554 614 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 TTC8Q8TAM2 541 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 OTUB2Q96DC9 234 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 CCSER2Q9H7U1 834 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 ECT2Q9H8V3 914 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 LMAN1LQ9HAT1 526 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 CYLDQ9NQC7 956 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 KCND1Q9NSA2 647 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 SPATA6Q9NWH7 488 aaPredicted RBP14.1□□□□□ -0.15
CLK3-218ENST00000566926 SMPD4Q9NXE4 827 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 CLIC5Q9NZA1 410 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 CNTN6Q9UQ52 1028 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 SH3BP1Q9Y3L3 701 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 WNT6Q9Y6F9 365 aa14.1□□□□□ -0.15
CLK3-218ENST00000566926 WDFY4Q6ZS81 3184 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 GOLGA6L9A6NEM1 432 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 CYP26A1O43174 497 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 MED7O43513 233 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 SERPING1P05155 500 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 RARGP13631 454 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 KRT5P13647 590 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 ARSAP15289 507 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 FERP16591 822 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 PLA2G4AP47712 749 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 SOX9P48436 509 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 JAM2P57087 298 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 PDE4CQ08493 712 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 GRSF1Q12849 480 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLK3-218ENST00000566926 PPP2R5DQ14738 602 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 EML3Q32P44 896 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 TMEM139Q8IV31 216 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 TXLNBQ8N3L3 684 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 KIAA1524Q8TCG1 905 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 KAT5Q92993 513 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 KREMEN1Q96MU8 473 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 ZNF830Q96NB3 372 aaPredicted RBP14.09□□□□□ -0.15
CLK3-218ENST00000566926 CHRDQ9H2X0 955 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 NLRC4Q9NPP4 1024 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 CFAP97Q9P2B7 532 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 DNAJC12Q9UKB3 198 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLK3-218ENST00000566926 FHOD1Q9Y613 1164 aa14.09□□□□□ -0.15
CLK3-218ENST00000566926 A0A1W2PQH9 124 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 F8VZ95 297 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 RNF225M0QZC1 329 aaPredicted RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 ZSCAN12O43309 604 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 GFPT2O94808 682 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 ZBED1O96006 694 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 CHRNB1P11230 501 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 GJA4P35212 333 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 CYLC1P35663 651 aaPredicted RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 PRKCIP41743 596 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 TKTL1P51854 596 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 ZNF132P52740 706 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 ZXDBP98169 803 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 FZD5Q13467 585 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 RAPGEF1Q13905 1077 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 PON2Q15165 354 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 ASIC2Q16515 512 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 PM20D1Q6GTS8 502 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 TXNDC11Q6PKC3 985 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 MAMSTRQ6ZN01 415 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 KCTD13Q8WZ19 329 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 LINC00597Q9H2U6 94 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 LUC7LQ9NQ29 371 aaKnown RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLK3-218ENST00000566926 LSM7Q9UK45 103 aaKnown RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
CLK3-218ENST00000566926 MYO18AQ92614 2054 aaKnown RBP14.08□□□□□ -0.16
CLK3-218ENST00000566926 M0QYV0 167 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 ADH1CP00326 375 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 DRD1P21728 446 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 SOX5P35711 763 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 COG7P83436 770 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
CLK3-218ENST00000566926 ARHGAP44Q17R89 818 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 PKDCCQ504Y2 493 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 C10orf120Q5SQS8 335 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 ZC3H14Q6PJT7 736 aaKnown RBP14.07□□□□□ -0.16
CLK3-218ENST00000566926 ADGRG2Q8IZP9 1017 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 SCML4Q8N228 414 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 CCDC26Q8TAB7 109 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
CLK3-218ENST00000566926 HSFY1Q96LI6 401 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 CCDC42Q96M95 316 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
CLK3-218ENST00000566926 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms