RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ZNF674Q2M3X9 581 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 AMOTQ4VCS5 1084 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ODF2Q5BJF6 829 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 C19orf54Q5BKX5 351 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ATXN7L2Q5T6C5 722 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 TRIM68Q6AZZ1 485 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MCTP2Q6DN12 878 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 DGAT2L7PQ6IED9 249 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF529Q6P280 563 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 PLBD1Q6P4A8 553 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CASC1Q6TDU7 716 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CD300LDQ6UXZ3 194 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ETV3LQ6ZN32 361 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 TAS1R1Q7RTX1 841 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 FRMD5Q7Z6J6 570 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 KRT73Q86Y46 540 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 RHOT2Q8IXI1 618 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 LILRA3Q8N6C8 439 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 TMCO5AQ8N6Q1 288 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 USP38Q8NB14 1042 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC17A8Q8NDX2 589 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 OR6J1Q8NGC5 347 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 PPP1R14CQ8TAE6 165 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 SCFD2Q8WU76 684 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CASKIN2Q8WXE0 1202 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 DACT3Q96B18 629 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF764Q96H86 408 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HIC2Q96JB3 615 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 GBP5Q96PP8 586 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 FUZQ9BT04 418 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HTATIP2Q9BUP3 242 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MECRQ9BV79 373 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 EDEM3Q9BZQ6 932 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 STN1Q9H668 368 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MRPS18AQ9NVS2 196 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HCFC1R1Q9NWW0 138 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 ZDHHC7Q9NXF8 308 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 PLA2G3Q9NZ20 509 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CPSF2Q9P2I0 782 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 LIMA1Q9UHB6 759 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CNOT11Q9UKZ1 510 aaKnown RBP3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM184BQ9ULE4 1060 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 CLCA2Q9UQC9 943 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 HDAC5Q9UQL6 1122 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 LYVE1Q9Y5Y7 322 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 FLT1P17948 1338 aa3.61□□□□□ -1.83
HERPUD1-211ENST00000566550 A0A0G2JNJ9 132 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 NPIPB15A6NHN6 443 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 HRKO00198 91 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MPHOSPH10O00566 681 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SYN3O14994 580 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MUSKO15146 869 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 HTATSF1O43719 755 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 TAF5LO75529 589 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 GOSR1O95249 250 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZBTB7AO95365 584 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 IL18BPO95998 194 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CYP21A2P08686 494 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 NR2F1P10589 423 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PEPDP12955 493 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SCG2P13521 617 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 RARGP13631 454 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 NTSR1P30989 418 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 TLX1P31314 330 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 GARSP41250 739 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CPA2P48052 419 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MRE11P49959 708 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 WNT3AP56704 352 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 RBP5P82980 135 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SRSF3P84103 164 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 PRR5P85299 388 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CAMK2DQ13557 499 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ATP1A4Q13733 1029 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CAMK1Q14012 370 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CCDC158Q5M9N0 1113 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF362Q5T0B9 420 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 UTP14CQ5TAP6 766 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 DEPDC1Q5TB30 811 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 LIPMQ5VYY2 423 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ABLIM2Q6H8Q1 611 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 MTFR2Q6P444 385 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CPLX2Q6PUV4 134 aaKnown RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 CYP20A1Q6UW02 462 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 DENND5BQ6ZUT9 1274 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF365Q70YC5 407 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 UBE2Q1Q7Z7E8 422 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SDCCAG8Q86SQ7 713 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 STK32CQ86UX6 486 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF280BQ86YH2 543 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ZFPM1Q8IX07 1006 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 BCL6BQ8N143 479 aaPredicted RBP3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SCML4Q8N228 414 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ARL6IP6Q8N6S5 226 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 FSIP1Q8NA03 581 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SPC24Q8NBT2 197 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 IL17RDQ8NFM7 739 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC22A17Q8WUG5 538 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 RSC1A1Q92681 617 aa3.6□□□□□ -1.83
HERPUD1-211ENST00000566550 ALG3Q92685 438 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms