RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ATICP31939 592 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ATP5OP48047 213 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 HSF5Q4G112 596 aaPredicted RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ZNF394Q53GI3 561 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ZNF667Q5HYK9 610 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CDHR3Q6ZTQ4 885 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 PRPF39Q86UA1 669 aaKnown RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CTAGE3PQ8IX95 158 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 DTX3LQ8TDB6 740 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 PANX3Q96QZ0 392 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CPXM1Q96SM3 734 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CALN1Q9BXU9 219 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 C10orf88Q9H8K7 445 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ETAA1Q9NY74 926 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CYTH4Q9UIA0 394 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ITGA11Q9UKX5 1188 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ZNF214Q9UL59 606 aaPredicted RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 KIAA1257Q9ULG3 409 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CCNT2O60583 730 aaKnown RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 TNFSF9P41273 254 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CDH6P55285 790 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 BACE1P56817 501 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 CDKL3Q8IVW4 592 aaPredicted RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 HSPH1Q92598 858 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 AZIN2Q96A70 460 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 ADPGKQ9BRR6 497 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 TCHPQ9BT92 498 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 TEX13BQ9BXU2 312 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 IFT122Q9HBG6 1241 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 XAB2Q9HCS7 855 aaKnown RBP22.38■■□□□ 1.17
SPSB3-208ENST00000566339 SLC7A8Q9UHI5 535 aa22.38■■□□□ 1.17
SPSB3-208ENST00000566339 VDRP11473 427 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 DESP17661 470 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 PTPN11Q06124 597 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-208ENST00000566339 RNF220Q5VTB9 566 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 SLC9A4Q6AI14 798 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 ACAD11Q709F0 780 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 CFAP36Q96G28 342 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 CENPKQ9BS16 269 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 VCX3AQ9NNX9 186 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 DMAP1Q9NPF5 467 aaPredicted RBP22.37■■□□□ 1.17
SPSB3-208ENST00000566339 ETNK2Q9NVF9 386 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 ARMCX1Q9P291 453 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 WASF2Q9Y6W5 498 aa22.37■■□□□ 1.17
SPSB3-208ENST00000566339 APOL1O14791 398 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 RTN3O95197 1032 aaPredicted RBP22.36■■□□□ 1.17
SPSB3-208ENST00000566339 PRDX6P30041 224 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 AQP5P55064 265 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 HIC1Q14526 733 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 C1orf146Q5VVC0 180 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 MPZL3Q6UWV2 235 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 TSHZ1Q6ZSZ6 1077 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 CAND1Q86VP6 1230 aaKnown RBP22.36■■□□□ 1.17
SPSB3-208ENST00000566339 KBTBD2Q8IY47 623 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 STKLD1Q8NE28 680 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 EBNA1BP2Q99848 306 aaKnown RBP22.36■■□□□ 1.17
SPSB3-208ENST00000566339 NDUFA13Q9P0J0 144 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 PCSK1NQ9UHG2 260 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 TBC1D30Q9Y2I9 924 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 PCDHA11Q9Y5I1 949 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 WDR90Q96KV7 1748 aa22.36■■□□□ 1.17
SPSB3-208ENST00000566339 SLC15A5A6NIM6 579 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 C2CD4BA6NLJ0 364 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 FZD9O00144 591 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PRPSAP2O60256 369 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 ZBED1O96006 694 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PRKCBP05771 671 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 HARSP12081 509 aaKnown RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 P4HA1P13674 534 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 ZFXP17010 805 aaPredicted RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 BTKQ06187 659 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 STILQ15468 1287 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 INSCQ1MX18 579 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 MAP3K21Q5TCX8 1036 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 IZUMO2Q6UXV1 221 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 CYP4V2Q6ZWL3 525 aaPredicted RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 NCAPG2Q86XI2 1143 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 CCNJLQ8IV13 435 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PLD5Q8N7P1 536 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 WNK4Q96J92 1243 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 NLRP4Q96MN2 994 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 ZNF670Q9BS34 389 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 THTPAQ9BU02 230 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PRDM16Q9HAZ2 1276 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 S100A14Q9HCY8 104 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 C19orf81C9J6K1 198 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 GLRA3O75311 464 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 GCATO75600 419 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 MICAL2O94851 1124 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 MLNP12872 115 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 CPOXP36551 454 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 CDK7P50613 346 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 TFAMQ00059 246 aaKnown RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 SP4Q02446 784 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PDCD2Q16342 344 aaPredicted RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 EFHC1Q5JVL4 640 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 EMC1Q8N766 993 aa22.35■■□□□ 1.17
SPSB3-208ENST00000566339 PIWIL2Q8TC59 973 aaKnown RBP22.35■■□□□ 1.17
SPSB3-208ENST00000566339 FAM172AQ8WUF8 416 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms