RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 BMP2KLQ5H9B9 411 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 FCRL6Q6DN72 434 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 TMEM108Q6UXF1 575 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ATF7IPQ6VMQ6 1270 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 GSPT2Q8IYD1 628 aaKnown RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 DEPTORQ8TB45 409 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF646O15015 1829 aaPredicted RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 A0A087WV62 115 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 AGPSO00116 658 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 PSMD14O00487 310 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ALAS1P13196 640 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 HOXD10P28358 340 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 FZD5Q13467 585 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 DHX8Q14562 1220 aaKnown RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ATP2B3Q16720 1220 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 LY6KQ17RY6 165 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 LMBRD2Q68DH5 695 aaPredicted RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 DRICH1Q6PGQ1 229 aaPredicted RBP4.8□□□□□ -1.64
LINC00561-201ENST00000565815 GDF7Q7Z4P5 450 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 MORC4Q8TE76 937 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 SCAMP4Q969E2 229 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 CXorf36Q9H7Y0 433 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 HESX1Q9UBX0 185 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 USP16Q9Y5T5 823 aa4.8□□□□□ -1.64
LINC00561-201ENST00000565815 ABCC4O15439 1325 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ABCC12Q96J65 1359 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 NUP98P52948 1817 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 hCG_1642624A0A1W2PR95 340 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 GPANK1O95872 356 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ITGB3P05106 788 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TPM2P07951 284 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 C1SP09871 688 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TXKP42681 527 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 NUCB1Q02818 461 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TOB2Q14106 344 aaPredicted RBP4.79□□□□□ -1.64
LINC00561-201ENST00000565815 CDSNQ15517 529 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SURF1Q15526 300 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TAF7Q15545 349 aaPredicted RBP4.79□□□□□ -1.64
LINC00561-201ENST00000565815 HS1BP3Q53T59 392 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 IZUMO3Q5VZ72 239 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 RAP1GAP2Q684P5 730 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ATP11CQ8NB49 1132 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 NLGN4YQ8NFZ3 816 aaPredicted RBP4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ZNF333Q96JL9 665 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 MSLNLQ96KJ4 702 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 GGA3Q9NZ52 723 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SERTAD3Q9UJW9 196 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SPATA31D3P0C874 917 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 MAN2A2P49641 1150 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SP3Q02447 781 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 OS9Q13438 667 aaPredicted RBP4.79□□□□□ -1.64
LINC00561-201ENST00000565815 MORC3Q14149 939 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SLC4A8Q2Y0W8 1093 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ANO1Q5XXA6 986 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 CRTC1Q6UUV9 634 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SPATA31D4Q6ZUB0 917 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TMPRSS9Q7Z410 1059 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ATG16L2Q8NAA4 619 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ZBTB45Q96K62 511 aaPredicted RBP4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TEPSINQ96N21 525 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 NELL2Q99435 816 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SPATA5L1Q9BVQ7 753 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 DEF6Q9H4E7 631 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SLC2A4RGQ9NR83 387 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 SMC4Q9NTJ3 1288 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 ZBTB40Q9NUA8 1239 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 GRHPRQ9UBQ7 328 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 TMX2Q9Y320 296 aa4.79□□□□□ -1.64
LINC00561-201ENST00000565815 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 IFRD1O00458 451 aaPredicted RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ECE2O60344 883 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 XRCC6P12956 609 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PTDSS1P48651 473 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SF3B3Q15393 1217 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SUPT20HL1Q3ZLR7 823 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 USP39Q53GS9 565 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ZFYVE27Q5T4F4 411 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SUSD4Q5VX71 490 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 FAM109BQ6ICB4 259 aaPredicted RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 OLFM4Q6UX06 510 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 NUP133Q8WUM0 1156 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ANP32BQ92688 251 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 IQCDQ96DY2 449 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PLEKHF1Q96S99 279 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 UNKQ9C0B0 810 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 GRPEL1Q9HAV7 217 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 SERHLQ9NQF3 203 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 CEP72Q9P209 647 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 YDJCA8MPS7 323 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 ERN1O75460 977 aaKnown RBP4.78□□□□□ -1.64
LINC00561-201ENST00000565815 MYL4P12829 197 aa4.78□□□□□ -1.64
LINC00561-201ENST00000565815 PEPDP12955 493 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms