RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CEP192Q8TEP8 1941 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 HMGB4Q8WW32 186 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 CNTNAP3BQ96NU0 1288 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 CNTNAP3Q9BZ76 1288 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 DNAJC17Q9NVM6 304 aaKnown RBP24.99■■□□□ 1.59
RAB40C-209ENST00000565511 MARK1Q9P0L2 795 aa24.99■■□□□ 1.59
RAB40C-209ENST00000565511 PATE3B3GLJ2 98 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 CACNG3O60359 315 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 CAVIN2O95810 425 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 TYRP14679 529 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 KCNA4P22459 653 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 P2RY2P41231 377 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 HSF5Q4G112 596 aaPredicted RBP24.98■■□□□ 1.59
RAB40C-209ENST00000565511 EOGTQ5NDL2 527 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 KLHDC10Q6PID8 442 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 ZNF513Q8N8E2 541 aaPredicted RBP24.98■■□□□ 1.59
RAB40C-209ENST00000565511 CCDC150Q8NCX0 1101 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 NDRG1Q92597 394 aaKnown RBP24.98■■□□□ 1.59
RAB40C-209ENST00000565511 BHMTQ93088 406 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 TMEM176AQ96HP8 235 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 BBS2Q9BXC9 721 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 DNMT3LQ9UJW3 386 aa24.98■■□□□ 1.59
RAB40C-209ENST00000565511 MAP1BP46821 2468 aaKnown RBP24.97■■□□□ 1.59
RAB40C-209ENST00000565511 PRRT4C9JH25 899 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 SLC16A3O15427 465 aaKnown RBP24.97■■□□□ 1.59
RAB40C-209ENST00000565511 CD44P16070 742 aaKnown RBP24.97■■□□□ 1.59
RAB40C-209ENST00000565511 MAP7D1Q3KQU3 841 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 TCERG1LQ5VWI1 586 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 ARHGAP17Q68EM7 881 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 GRAMD4Q6IC98 578 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 BHLHA9Q7RTU4 235 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 PIGZQ86VD9 579 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 UBR7Q8N806 425 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 CD248Q9HCU0 757 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 RMND1Q9NWS8 449 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 PLK2Q9NYY3 685 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 COQ4Q9Y3A0 265 aa24.97■■□□□ 1.59
RAB40C-209ENST00000565511 A0A1W2PQF6 199 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 CISD3P0C7P0 127 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 PI4KAP42356 2102 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 RAB41Q5JT25 222 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 IL31Q6EBC2 164 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 ISM2Q6H9L7 571 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 SLC35C1Q96A29 364 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 GSDMAQ96QA5 445 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 EDEM2Q9BV94 578 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 RASAL2Q9UJF2 1139 aa24.96■■□□□ 1.59
RAB40C-209ENST00000565511 LSM7Q9UK45 103 aaKnown RBP24.96■■□□□ 1.59
RAB40C-209ENST00000565511 CIZ1Q9ULV3 898 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-209ENST00000565511 LNP1A1A4G5 178 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 ALDH1A2O94788 518 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 HMBSP08397 361 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 GABRG2P18507 467 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 TRIM21P19474 475 aaKnown RBP24.95■■□□□ 1.58
RAB40C-209ENST00000565511 PLA2G4AP47712 749 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 EFEMP1Q12805 493 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 GOLGA7BQ2TAP0 167 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 KIAA1211LQ6NV74 962 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 ARMCX6Q7L4S7 300 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 FAXDC2Q96IV6 333 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 POLMQ9NP87 494 aaPredicted RBP24.95■■□□□ 1.58
RAB40C-209ENST00000565511 BCCIPQ9P287 314 aaKnown RBP eCLIP24.95■■□□□ 1.58
RAB40C-209ENST00000565511 STARD13Q9Y3M8 1113 aa24.95■■□□□ 1.58
RAB40C-209ENST00000565511 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 STX10O60499 249 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 PTGER3P43115 390 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 DHPSP49366 369 aaPredicted RBP24.94■■□□□ 1.58
RAB40C-209ENST00000565511 LRMPQ12912 555 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 CUL2Q13617 745 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 RNF43Q68DV7 783 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 CYP2U1Q7Z449 544 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 TMEFF1Q8IYR6 380 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 ZNF276Q8N554 614 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 SMARCE1Q969G3 411 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 TSG101Q99816 390 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 CD93Q9NPY3 652 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 CLIC5Q9NZA1 410 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 CACNA1BQ00975 2339 aa24.94■■□□□ 1.58
RAB40C-209ENST00000565511 HOXB2P14652 356 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 FKBP3Q00688 224 aaKnown RBP24.93■■□□□ 1.58
RAB40C-209ENST00000565511 PDE4CQ08493 712 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 GOLGA8FQ08AF8 430 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 GOLGA8DPQ0D2H9 430 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 C11orf74Q86VG3 221 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 ANKRD52Q8NB46 1076 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 ULBP1Q9BZM6 244 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 SLC6A17Q9H1V8 727 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 MAN1B1Q9UKM7 699 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 RAD54BQ9Y620 910 aa24.93■■□□□ 1.58
RAB40C-209ENST00000565511 ASCC3Q8N3C0 2202 aaKnown RBP24.93■■□□□ 1.58
RAB40C-209ENST00000565511 ATXN2Q99700 1313 aaKnown RBP24.92■■□□□ 1.58
RAB40C-209ENST00000565511 RALAP11233 206 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 BMP6P22004 513 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 NTSR1P30989 418 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 CORO1AP31146 461 aaKnown RBP24.92■■□□□ 1.58
RAB40C-209ENST00000565511 PSEN1P49768 467 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 PIGKQ92643 395 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 KAT5Q92993 513 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 CCDC34Q96HJ3 373 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 XPO6Q96QU8 1125 aaKnown RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms