RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HTR3DQ70Z44 454 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 DPH6Q7L8W6 267 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 FAM124AQ86V42 546 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 GATAD2AQ86YP4 633 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CCDC83Q8IWF9 413 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 HSCBQ8IWL3 235 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 TOP6BLQ8N6T0 577 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 UCMAQ8WVF2 138 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 RFFLQ8WZ73 363 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 KCNN1Q92952 543 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 C8orf48Q96LL4 319 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 ELF4Q99607 663 aaPredicted RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 ACE2Q9BYF1 805 aaPredicted RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 C6orf106Q9H6K1 298 aaPredicted RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 GDAP2Q9NXN4 497 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 KCND2Q9NZV8 630 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 ADAMTS1Q9UHI8 967 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 CDH9Q9ULB4 789 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 R3HCC1Q9Y3T6 440 aaKnown RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 KIAA1549LQ6ZVL6 1849 aa9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 SPTAN1Q13813 2472 aaKnown RBP9.6□□□□□ -0.87
VPS9D1-205ENST00000565452 K7ENP7 123 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 CBX4O00257 560 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 VILLO15195 856 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 YKT6O15498 198 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 COCHO43405 550 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 TSPAN3O60637 253 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 ATP2C2O75185 946 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 IL18RAPO95256 599 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 MT-CO3P00414 261 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 KRT10P13645 584 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 YWHAQP27348 245 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 ABCD1P33897 745 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 BCAT1P54687 386 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 INHBCP55103 352 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 CDH8P55286 799 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 RACK1P63244 317 aaKnown RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 BECN1Q14457 450 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 SGO2Q562F6 1265 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 INO80CQ6PI98 192 aaPredicted RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 KDM7AQ6ZMT4 941 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 TPGS1Q6ZTW0 290 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 ADGRF2Q8IZF7 708 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 KCTD17Q8N5Z5 321 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 CSGALNACT2Q8N6G5 542 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 LRRC52Q8N7C0 313 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 FAM184AQ8NB25 1140 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 SAP25Q8TEE9 199 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 OVCA2Q8WZ82 227 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 NACA2Q9H009 215 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 THAP10Q9P2Z0 257 aaPredicted RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 CHORDC1Q9UHD1 332 aaPredicted RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 AGO2Q9UKV8 859 aaKnown RBP9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 SNX9Q9Y5X1 595 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 AHCTF1Q8WYP5 2266 aa9.59□□□□□ -0.87
VPS9D1-205ENST00000565452 F8VP50 259 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SUV39H1O43463 412 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 TRAK2O60296 914 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 DTNBO60941 627 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 FSBPO95073 299 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SFTPCP11686 197 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 FDPSP14324 419 aaKnown RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 PLCG1P19174 1290 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 PDCP20941 246 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 ACO1P21399 889 aaKnown RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 POLR2BP30876 1174 aaKnown RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 ACSL1P33121 698 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 LSSP48449 732 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 ARRB1P49407 418 aaPredicted RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 RBP5P82980 135 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 TFAMQ00059 246 aaKnown RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 ENPP2Q13822 863 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 KCNT1Q5JUK3 1230 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 PRAMEF14Q5SWL7 426 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 CCDC81Q6ZN84 652 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 OSTM1Q86WC4 334 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 NUP93Q8N1F7 819 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 IGSF22Q8N9C0 903 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SYT2Q8N9I0 419 aaPredicted RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 MYLPFQ96A32 169 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 BIRC7Q96CA5 298 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 CCDC97Q96F63 343 aaPredicted RBP9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 MMS19Q96T76 1030 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 BTBD1Q9H0C5 482 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 THSD1Q9NS62 852 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 MARK1Q9P0L2 795 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SMC3Q9UQE7 1217 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 SLCO1B1Q9Y6L6 691 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 DENND4CQ5VZ89 1909 aa9.58□□□□□ -0.88
VPS9D1-205ENST00000565452 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms