RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	ZFX	P17010	805 aa	Predicted RBP	5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	HOXB6	P17509	224 aa	Known RBP	5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	PPM1F	P49593	454 aa	Predicted RBP	5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	RGS19	P49795	217 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	PDE1A	P54750	535 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	TIRAP	P58753	221 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	ATP1A4	Q13733	1029 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	PTPRR	Q15256	657 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	TXNRD1	Q16881	649 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	TIGD6	Q17RP2	521 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	ZNF618	Q5T7W0	954 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	TEDDM1	Q5T9Z0	273 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	KAZN	Q674X7	775 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	LIN54	Q6MZP7	749 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	LDHAL6A	Q6ZMR3	332 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	DPY19L3	Q6ZPD9	716 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	OR1N1	Q8NGS0	311 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	RFK	Q969G6	155 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	PAGR1	Q9BTK6	254 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	DPCD	Q9BVM2	203 aa	Predicted RBP	5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	ZCWPW1	Q9H0M4	648 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	TMEM8A	Q9HCN3	771 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	LUZP4	Q9P127	313 aa		5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	CCNL1	Q9UK58	526 aa	Predicted RBP	5.19	□□□□□ -1.58
CHD9-215	ENST00000565442	WDR27	A2RRH5	827 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442		J3KTA2	159 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	PSMD9	O00233	223 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	DNPH1	O43598	174 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	GLP2R	O95838	553 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	ITGA5	P08648	1049 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	VEGFA	P15692	232 aa	Predicted RBP	5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	HTR7	P34969	479 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	RENBP	P51606	427 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	ALDH18A1	P54886	795 aa	Known RBP	5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	POSTN	Q15063	836 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	SULT6B1	Q6IMI4	303 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	LRRC71	Q8N4P6	559 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	SUN3	Q8TAQ9	357 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	TBC1D20	Q96BZ9	403 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	PBK	Q96KB5	322 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	KATNAL1	Q9BW62	490 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	KLK15	Q9H2R5	256 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	HELLS	Q9NRZ9	838 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	FOXJ2	Q9P0K8	574 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	CA14	Q9ULX7	337 aa		5.18	□□□□□ -1.58
CHD9-215	ENST00000565442	OR2W5	A6NFC9	320 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	AP4M1	O00189	453 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	NXPH3	O95157	252 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	NTSR2	O95665	410 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	KLRK1	P26718	216 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	AKT1	P31749	480 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	MRPS35	P82673	323 aa	Known RBP	5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	BMPR2	Q13873	1038 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	PRKG1	Q13976	671 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	GRM4	Q14833	912 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	GPR162	Q16538	588 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	C4orf46	Q504U0	113 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	KIAA0895L	Q68EN5	471 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	ZNF425	Q6IV72	752 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	KLHL17	Q6TDP4	642 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	CPXCR1	Q8N123	301 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	TRAPPC12	Q8WVT3	735 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	TRIM63	Q969Q1	353 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	TMEM120A	Q9BXJ8	343 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	FSCN3	Q9NQT6	498 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	LRIT1	Q9P2V4	623 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	LPAR3	Q9UBY5	353 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	STEAP1	Q9UHE8	339 aa		5.17	□□□□□ -1.58
CHD9-215	ENST00000565442	COL15A1	P39059	1388 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PNMA6E	A0A0J9YXQ4	647 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	IPO5	O00410	1097 aa	Known RBP	5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PMPCB	O75439	489 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	TAF5L	O75529	589 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	ONECUT2	O95948	504 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	ANXA6	P08133	673 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	ITGA2B	P08514	1039 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	CD19	P15391	556 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	CYP2C18	P33260	490 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PBX1	P40424	430 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PROK1	P58294	105 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	FOXO1	Q12778	655 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	RAPGEF1	Q13905	1077 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	TAF5	Q15542	800 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	CYP1B1	Q16678	543 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	TRIM71	Q2Q1W2	868 aa	Known RBP	5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	P3H1	Q32P28	736 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	NBPF8	Q3BBV2	869 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	RINT1	Q6NUQ1	792 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	ZNF788	Q6ZQV5	615 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PEG10	Q86TG7	708 aa	Known RBP	5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	RAB11FIP4	Q86YS3	637 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	STT3B	Q8TCJ2	826 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	EID2B	Q96D98	161 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	WDYHV1	Q96HA8	205 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	PRR25	Q96S07	402 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	WDR24	Q96S15	920 aa		5.16	□□□□□ -1.58
CHD9-215	ENST00000565442	MLXIP	Q9HAP2	919 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms