RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NT5C1AQ9BXI3 368 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 NACA2Q9H009 215 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 CYP3A43Q9HB55 503 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 PNPLA8Q9NP80 782 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 BCCIPQ9P287 314 aaKnown RBP eCLIP9.05□□□□□ -0.96
CAPN3-213ENST00000565173 FBXO10Q9UK96 956 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 NUDT5Q9UKK9 219 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 MAPK8IP1Q9UQF2 711 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 FRMD4BQ9Y2L6 1034 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 USP3Q9Y6I4 520 aa9.05□□□□□ -0.96
CAPN3-213ENST00000565173 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 NEDD8-MDP1E9PL57 170 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 MAP3K13O43283 966 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 STC2O76061 302 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 CLSTN1O94985 981 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 KLKB1P03952 638 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 RARGP13631 454 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 CEACAM1P13688 526 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 ITPKAP23677 461 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 NR2F2P24468 414 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 WASP42768 502 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 SYKP43405 635 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 ADAM9Q13443 819 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 BYSLQ13895 437 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 ZCWPW2Q504Y3 356 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 TRIM61Q5EBN2 209 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 GRAMD4Q6IC98 578 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 NUDT18Q6ZVK8 323 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 INTS8Q75QN2 995 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 ARMCX6Q7L4S7 300 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 CCDC186Q7Z3E2 898 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 FAM186BQ8IYM0 893 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 PGBD3Q8N328 593 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 DEFB119Q8N690 84 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 IPO4Q8TEX9 1081 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 JAKMIP2Q96AA8 810 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 SPATA32Q96LK8 384 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 BBS2Q9BXC9 721 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 DUSP16Q9BY84 665 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 NIF3L1Q9GZT8 377 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 GOLPH3LQ9H4A5 285 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 DNAJC17Q9NVM6 304 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 WDR35Q9P2L0 1181 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 DNMT3LQ9UJW3 386 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 CIZ1Q9ULV3 898 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 PCDHA5Q9Y5H7 936 aa9.04□□□□□ -0.96
CAPN3-213ENST00000565173 ATXN2Q99700 1313 aaKnown RBP9.04□□□□□ -0.96
CAPN3-213ENST00000565173 IGHV1OR15-9A0A0B4J2B8 117 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 WASH3PC4AMC7 463 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 TOP3BO95985 862 aaKnown RBP9.03□□□□□ -0.96
CAPN3-213ENST00000565173 HOXB2P14652 356 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 ENGP17813 658 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 CD58P19256 250 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 NDUFV2P19404 249 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 GTF2H1P32780 548 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 HOXD12P35452 270 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 PSMC2P35998 433 aaKnown RBP9.03□□□□□ -0.96
CAPN3-213ENST00000565173 PSEN1P49768 467 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 RPL6Q02878 288 aaKnown RBP9.03□□□□□ -0.96
CAPN3-213ENST00000565173 LMAN2Q12907 356 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 UAP1L1Q3KQV9 507 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 C10orf120Q5SQS8 335 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 FYB2Q5VWT5 728 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 KRBA2Q6ZNG9 492 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 PIP4P1Q86T03 277 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 SLC41A1Q8IVJ1 513 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 SLC4A11Q8NBS3 891 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 FAXDC2Q96IV6 333 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 MRGPRX1Q96LB2 322 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 XPO6Q96QU8 1125 aaKnown RBP9.03□□□□□ -0.96
CAPN3-213ENST00000565173 NUSAP1Q9BXS6 441 aaKnown RBP9.03□□□□□ -0.96
CAPN3-213ENST00000565173 IMPG2Q9BZV3 1241 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 SLC6A17Q9H1V8 727 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 CAPN10Q9HC96 672 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 TMEM8AQ9HCN3 771 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 CD93Q9NPY3 652 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 PLK2Q9NYY3 685 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 CALCOCO1Q9P1Z2 691 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 NAGPAQ9UK23 515 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 GON4LQ3T8J9 2241 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 MYH10P35580 1976 aa9.03□□□□□ -0.96
CAPN3-213ENST00000565173 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.96
CAPN3-213ENST00000565173 A0A1W2PQ27 194 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 A0A1W2PQ64 194 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 A0A1W2PQD8 194 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 UPK3BL1B0FP48 263 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 C1QTNF9BB2RNN3 333 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 UPK3BL2E5RIL1 263 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 AP5Z1O43299 807 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF202O95125 648 aa9.02□□□□□ -0.97
CAPN3-213ENST00000565173 KIF20AO95235 890 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms