RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 ADIGQ0VDE8 80 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PTK7Q13308 1070 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 KCNJ11Q14654 390 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PDK1Q15118 436 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 DCAF6Q58WW2 860 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 MDH1BQ5I0G3 518 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 TTC39BQ5VTQ0 682 aaPredicted RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 ADGRD1Q6QNK2 874 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 CTAGE3PQ8IX95 158 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 C4orf33Q8N1A6 199 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PCDH19Q8TAB3 1148 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PPP1R13LQ8WUF5 828 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 KCTD13Q8WZ19 329 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 CENPIQ92674 756 aaPredicted RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 RTP4Q96DX8 246 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PIWIL1Q96J94 861 aaKnown RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 TRIM62Q9BVG3 475 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 HAUS2Q9NVX0 235 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 ZC3H7BQ9UGR2 993 aaKnown RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 BANF1O75531 89 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 GCATO75600 419 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 TROVE2P10155 538 aaKnown RBP eCLIP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 RARBP10826 455 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 FGFR1P11362 822 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PAX3P23760 479 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PCSK1P29120 753 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 LRPAP1P30533 357 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 L1CAMP32004 1257 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 NOS2P35228 1153 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 SCTRP47872 440 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 RAB27AP51159 221 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 AIF1P55008 147 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 GPX6P59796 221 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 ADAM17P78536 824 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 MRPS5P82675 430 aaKnown RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 DEUP1Q05D60 604 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 MTFR1Q15390 333 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 TRNP1Q6NT89 227 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 RGMBQ6NW40 437 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 IFNL1Q8IU54 200 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 DEFB106AQ8N104 65 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 PQLC3Q8N755 202 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 SMG8Q8ND04 991 aaKnown RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 QKIQ96PU8 341 aaKnown RBP eCLIP5.28□□□□□ -1.565e-6■■■■□ 24.8
DNAAF4-CCPG1-201ENST00000565113 KCTD15Q96SI1 283 aaPredicted RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 KRT82Q9NSB4 513 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 DDX43Q9NXZ2 648 aaKnown RBP5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 GIT1Q9Y2X7 761 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 MAD1L1Q9Y6D9 718 aa5.28□□□□□ -1.56
DNAAF4-CCPG1-201ENST00000565113 SYNJ2BP-COX16A0A087WUM0 186 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 CFAP73A6NFT4 308 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 EEF2KO00418 725 aaKnown RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 LPXNO60711 386 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 DNAJC8O75937 253 aaPredicted RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TMEM63AO94886 807 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 MYCNP04198 464 aaPredicted RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 ODC1P11926 461 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 RPL9P32969 192 aaKnown RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 RPL34P49207 117 aaKnown RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 IFRD2Q12894 506 aaPredicted RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 NME3Q13232 169 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 WSCD1Q658N2 575 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 C17orf99Q6UX52 265 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 PIGZQ86VD9 579 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 FAM228AQ86W67 206 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 MCUQ8NE86 351 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 CCT6BQ92526 530 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 PGBD4Q96DM1 585 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TSPYL2Q9H2G4 693 aaPredicted RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 POPDC2Q9HBU9 364 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 RNF19AQ9NV58 838 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 COX16Q9P0S2 106 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 FZD10Q9ULW2 581 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 ST3GAL5Q9UNP4 418 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 NOD1Q9Y239 953 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 STARD13Q9Y3M8 1113 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 KBTBD13C9JR72 458 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 M0QYT0 321 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 IGF2BP3O00425 579 aaKnown RBP eCLIP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 SPTLC1O15269 473 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 DCTN3O75935 186 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 KRT38O76015 456 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 SKIP12755 728 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 CREB1P16220 341 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TPSB2P20231 275 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 RPA3P35244 121 aaPredicted RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TKTL1P51854 596 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 MAP3K7CLP57077 242 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 SF3A3Q12874 501 aaKnown RBP eCLIP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 TPSAB1Q15661 275 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 CA9Q16790 459 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 CCDC142Q17RM4 750 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 FAM133BQ5BKY9 247 aaKnown RBP5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 SLC26A11Q86WA9 606 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 THEM5Q8N1Q8 247 aa5.27□□□□□ -1.57
DNAAF4-CCPG1-201ENST00000565113 HTR3CQ8WXA8 447 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms