RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PAPSS2O95340 614 aaPredicted RBP14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 KRT5P13647 590 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 PLA2G4AP47712 749 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 PSEN1P49768 467 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 DMC1Q14565 340 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 STX1AQ16623 288 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 HSP90AA4PQ58FG1 418 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 EMC10Q5UCC4 262 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 ENOX1Q8TC92 643 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 SECISBP2LQ93073 1101 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 ACDQ96AP0 544 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 OTUB2Q96DC9 234 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 SPHK2Q9NRA0 654 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 GMEB2Q9UKD1 530 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 USP18Q9UMW8 372 aa14.31□□□□□ -0.12
VPS9D1-204ENST00000565023 ACACBO00763 2458 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 SLC12A8A0AV02 714 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 TRIM24O15164 1050 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 KAT7O95251 611 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 ZBED1O96006 694 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 MTIF2P46199 727 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 GJB7Q6PEY0 223 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 C11orf57Q6ZUT1 292 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 HTR3DQ70Z44 454 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 TADA2BQ86TJ2 420 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 WDR5BQ86VZ2 330 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 SIX6OS1Q8N1H7 587 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 USP33Q8TEY7 942 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 EDEM1Q92611 657 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 ERLEC1Q96DZ1 483 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 KREMEN1Q96MU8 473 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 BBS2Q9BXC9 721 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 FAM124BQ9H5Z6 455 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 PLK2Q9NYY3 685 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 INVSQ9Y283 1065 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 SPAG17Q6Q759 2223 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 OTOGLQ3ZCN5 2332 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 GPR179Q6PRD1 2367 aa14.3□□□□□ -0.12
VPS9D1-204ENST00000565023 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 AXIN1O15169 862 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 TULP3O75386 442 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 STC2O76061 302 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 LETM1O95202 739 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 KLF8O95600 359 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 PAEPP09466 180 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 SETSIPP0DME0 302 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 USP8P40818 1118 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 DGKEP52429 567 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 APBA1Q02410 837 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 TYRO3Q06418 890 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 ARHGAP44Q17R89 818 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 RAB41Q5JT25 222 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 SYT13Q7L8C5 426 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 ARHGAP18Q8N392 663 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 ALLCQ8N6M5 410 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 KIAA1958Q8N8K9 716 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 TXNDC5Q8NBS9 432 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 TSTD1Q8NFU3 115 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 TPSD1Q9BZJ3 242 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 UBXN6Q9BZV1 441 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 DNAJC17Q9NVM6 304 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 CLIC5Q9NZA1 410 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 MARCH2Q9P0N8 246 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 DEC1Q9P2X7 70 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 STRIP2Q9ULQ0 834 aa14.29□□□□□ -0.12
VPS9D1-204ENST00000565023 GREM1O60565 184 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 RPP40O75818 363 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 TYRP14679 529 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 SLC9A1P19634 815 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 CORO1AP31146 461 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 EIF2DP41214 584 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 GRIA2P42262 883 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 WASP42768 502 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 SPEM2Q0P670 501 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 C10orf76Q5T2E6 689 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 GRAMD4Q6IC98 578 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 ANO7Q6IWH7 933 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 PMF1Q6P1K2 205 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 LCLAT1Q6UWP7 414 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 DENND1CQ8IV53 801 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 RNF139Q8WU17 664 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 CDK5RAP1Q96SZ6 601 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 MIS12Q9H081 205 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 SAMSN1Q9NSI8 373 aaKnown RBP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 SFMBT1Q9UHJ3 866 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 KIAA1257Q9ULG3 409 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 NFE2L3Q9Y4A8 694 aa14.28□□□□□ -0.12
VPS9D1-204ENST00000565023 YJEFN3A6XGL0 299 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 E7ENQ6 273 aa14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
VPS9D1-204ENST00000565023 HOXC11O43248 304 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms