RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PEX5LQ8IYB4 626 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCDC105Q8IYK2 499 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EFCAB3Q8N7B9 438 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPDL1Q96EA4 605 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 AGAP3Q96P47 875 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 LNPEPQ9UIQ6 1025 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NME7Q9Y5B8 376 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ALG6Q9Y672 507 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPACA6W5XKT8 324 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ERI2A8K979 691 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 C2orf74A8MZ97 194 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 WWP2O00308 870 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 KPNA5O15131 536 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CAND2O75155 1236 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 PLS3P13797 630 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TUFMP49411 452 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 TMED10P49755 219 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCT8P50990 548 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ERVK-9P63128 1117 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 STXBP2Q15833 593 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MEI1Q5TIA1 1274 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FKBP1CQ5VVH2 108 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZNF655Q8N720 491 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 BORCS6Q96GS4 357 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZMAT2Q96NC0 199 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SMIM14Q96QK8 99 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SEMA4AQ9H3S1 761 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CAAP1Q9H8G2 361 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ACTR5Q9H9F9 607 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 APEX2Q9UBZ4 518 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SNX9Q9Y5X1 595 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EME2A4GXA9 379 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 A6NJR5 290 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ENO4A6NNW6 628 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 E7EVH7 732 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CTNND1O60716 968 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 CACNA2D1P54289 1103 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 AIF1P55008 147 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MAD2L1Q13257 205 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 ACAP1Q15027 740 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 GPAT2Q6NUI2 795 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 BRI3BPQ8WY22 251 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TRMT13Q9NUP7 481 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 UBA2Q9UBT2 640 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 STAP1Q9ULZ2 295 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SF3B1O75533 1304 aaKnown RBP eCLIP3.47□□□□□ -1.855e-6■■■■■ 75
CHD9-213ENST00000564845 UGT1A9O60656 530 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CETPP11597 493 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SLC18A3Q16572 532 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SH3GL1Q99961 368 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 UGT1A7Q9HAW7 530 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 UGT1A10Q9HAW8 530 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 UGT1A8Q9HAW9 530 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 CCL22O00626 93 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TNNC2P02585 160 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ECHS1P30084 290 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 BEND6Q5SZJ8 279 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 TRAPPC11Q7Z392 1133 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 LMO3Q8TAP4 145 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MYCBPAPQ8TBZ2 947 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 NSUN6Q8TEA1 469 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 KLC2Q9H0B6 622 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 KLHL3Q9UH77 587 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PCDHGC5Q9Y5F6 944 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZZEF1O43149 2961 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 LCTP09848 1927 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 IQANK1A0A1B0GTG1 560 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZC3H11AO75152 810 aaKnown RBP eCLIP3.47□□□□□ -1.85
CHD9-213ENST00000564845 HLA-DRAP01903 254 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SUPT20HL2P0C7V6 817 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SMPD1P17405 629 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 HSD17B4P51659 736 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 STX5Q13190 355 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 GK3PQ14409 553 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ATAD3BQ5T9A4 648 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ARHGAP17Q68EM7 881 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZNF598Q86UK7 904 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZC3HC1Q86WB0 502 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 PARD3BQ8TEW8 1205 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 RNPC3Q96LT9 517 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 PALMDQ9NP74 551 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 NRBP2Q9NSY0 501 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SNX12Q9UMY4 172 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 NOVA2Q9UNW9 492 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 AGAP1Q9UPQ3 857 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 SMG5Q9UPR3 1016 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 KCNH4Q9UQ05 1017 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PLAAQ9Y263 795 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PCDHA3Q9Y5H8 950 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PARP14Q460N5 1801 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 ZNFX1Q9P2E3 1918 aaKnown RBP3.47□□□□□ -1.85
CHD9-213ENST00000564845 CFAP69A5D8W1 941 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 LACTBL1A8MY62 500 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 MDM4O15151 490 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 RALAP11233 206 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TAC1P20366 129 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 GNA15P30679 374 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 PSPHP78330 225 aa3.47□□□□□ -1.85
CHD9-213ENST00000564845 TERF2Q15554 542 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms