RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MEX3CQ5U5Q3 659 aaKnown RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 NGDNQ8NEJ9 315 aaKnown RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 SUN3Q8TAQ9 357 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 OSR1Q8TAX0 266 aaPredicted RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 DENND1AQ8TEH3 1009 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 FAM118BQ9BPY3 351 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 NAA15Q9BXJ9 866 aaKnown RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 ZCWPW1Q9H0M4 648 aa5.7□□□□□ -1.5
UBR1-205ENST00000564540 GAR1Q9NY12 217 aaKnown RBP5.7□□□□□ -1.5
UBR1-205ENST00000564540 A0A1W2PPC4 97 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 CLCA1A8K7I4 914 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 E5RJQ4 531 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 DSCR3O14972 297 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 AREL1O15033 823 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 WDR47O94967 919 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 TRIM27P14373 513 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 PBX1P40424 430 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 TXNL4AP83876 142 aaKnown RBP5.69□□□□□ -1.5
UBR1-205ENST00000564540 GPS1Q13098 491 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 CC2D1BQ5T0F9 858 aaKnown RBP5.69□□□□□ -1.5
UBR1-205ENST00000564540 TMTC4Q5T4D3 741 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 ABLIM2Q6H8Q1 611 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 P3H2Q8IVL5 708 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 FAM71DQ8N9W8 422 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 MAP4K1Q92918 833 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 VPS16Q9H269 839 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 SAP30LQ9HAJ7 183 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 VPS45Q9NRW7 570 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 MYO1AQ9UBC5 1043 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 FZD4Q9ULV1 537 aa5.69□□□□□ -1.5
UBR1-205ENST00000564540 APOL1O14791 398 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 KIF3BO15066 747 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 RNF8O76064 485 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 MBPP02686 304 aaPredicted RBP5.68□□□□□ -1.5
UBR1-205ENST00000564540 GALNSP34059 522 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 MMP13P45452 471 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 ACOX1Q15067 660 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 AASDHQ4L235 1098 aaPredicted RBP5.68□□□□□ -1.5
UBR1-205ENST00000564540 VSTM1Q6UX27 236 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 PJA1Q8NG27 643 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 MAGEB5Q9BZ81 275 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 ZBTB26Q9HCK0 441 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 ZNF521Q96K83 1311 aa5.68□□□□□ -1.5
UBR1-205ENST00000564540 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 ADAM10O14672 748 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 CBFA2T3O75081 653 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 COQ9O75208 318 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 NDST3O95803 873 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 TMIGD3P0DMS9 266 aaPredicted RBP5.67□□□□□ -1.5
UBR1-205ENST00000564540 MST1P26927 711 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 GNALP38405 381 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 CCDC15Q0P6D6 951 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 IFIT5Q13325 482 aaKnown RBP5.67□□□□□ -1.5
UBR1-205ENST00000564540 DNASE1L3Q13609 305 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 PMS2P11Q13670 270 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 RABEP1Q15276 862 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 FAXCQ5TGI0 409 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 RAP1GAP2Q684P5 730 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 KSR2Q6VAB6 950 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 KIAA0408Q6ZU52 694 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 CCDC28AQ8IWP9 274 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.67□□□□□ -1.5
UBR1-205ENST00000564540 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 ZNF48Q96MX3 618 aaPredicted RBP5.67□□□□□ -1.5
UBR1-205ENST00000564540 WDR24Q96S15 920 aa5.67□□□□□ -1.5
UBR1-205ENST00000564540 TRNAU1APQ9NX07 287 aaKnown RBP5.67□□□□□ -1.5
UBR1-205ENST00000564540 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
UBR1-205ENST00000564540 PPEF2O14830 753 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 KCNQ3O43525 872 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 NCK2O43639 380 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 MOSPD3O75425 235 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 MYL4P12829 197 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 DRD1P21728 446 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 HOXD9P28356 352 aaPredicted RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 YPEL5P62699 121 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 RAE1P78406 368 aaKnown RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 GHRHRQ02643 423 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 KPNB1Q14974 876 aaKnown RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 TRIP6Q15654 476 aaKnown RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 TMEM63BQ5T3F8 832 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 HIBCHQ6NVY1 386 aaPredicted RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 BEND5Q7L4P6 421 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 CCDC150Q8NCX0 1101 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 ABHD5Q8WTS1 349 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 HIC2Q96JB3 615 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 CINPQ9BW66 212 aaPredicted RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 COLEC11Q9BWP8 271 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 PCDHAC1Q9H158 963 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 ELOVL5Q9NYP7 299 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
UBR1-205ENST00000564540 VPS4AQ9UN37 437 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 MAN2B2Q9Y2E5 1009 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 PCDHB2Q9Y5E7 798 aa5.66□□□□□ -1.5
UBR1-205ENST00000564540 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.5
UBR1-205ENST00000564540 HARSP12081 509 aaKnown RBP5.65□□□□□ -1.5
UBR1-205ENST00000564540 TNFSF4P23510 183 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 GABRB3P28472 473 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 ARL13BQ3SXY8 428 aa5.65□□□□□ -1.5
UBR1-205ENST00000564540 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms