RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 M0R296 226 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 CAPN9O14815 690 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 BUB1O43683 1085 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 LAMP2P13473 410 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 PSEN1P49768 467 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 NTHL1P78549 312 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TAF10Q12962 218 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 PPP1R15BQ5SWA1 713 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 BTBD8Q5XKL5 378 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 HFE2Q6ZVN8 426 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 ARCQ7LC44 396 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 C17orf53Q8N3J3 647 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-208ENST00000564247 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 CLEC4CQ8WTT0 213 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 NDRG1Q92597 394 aaKnown RBP17.73■□□□□ 0.43
CMTM3-208ENST00000564247 PSMG2Q969U7 264 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 NXPE3Q969Y0 559 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 ASIC4Q96FT7 647 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 MCEEQ96PE7 176 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TTLL2Q9BWV7 592 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 KCNK12Q9HB15 430 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 OSGEPQ9NPF4 335 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 TLR8Q9NR97 1041 aaKnown RBP17.73■□□□□ 0.43
CMTM3-208ENST00000564247 DNMT3BQ9UBC3 853 aaKnown RBP17.73■□□□□ 0.43
CMTM3-208ENST00000564247 IP6K2Q9UHH9 426 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
CMTM3-208ENST00000564247 FAM92AA1XBS5 289 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 E7ENQ6 273 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 GRAP2O75791 330 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 MOCS3O95396 460 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 ABL1P00519 1130 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 LTFP02788 710 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 PTPN2P17706 415 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 RFC1P35251 1148 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-208ENST00000564247 PPP3CCP48454 512 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 YWHAGP61981 247 aaKnown RBP eCLIP17.72■□□□□ 0.43
CMTM3-208ENST00000564247 USP46P62068 366 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 TDGQ13569 410 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 TAF5Q15542 800 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 PABPC1LQ4VXU2 614 aaKnown RBP17.72■□□□□ 0.43
CMTM3-208ENST00000564247 BSPRYQ5W0U4 402 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 STKLD1Q8NE28 680 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 OVCA2Q8WZ82 227 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 TRMT2BQ96GJ1 504 aaKnown RBP17.72■□□□□ 0.43
CMTM3-208ENST00000564247 MYRFLQ96LU7 910 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 ALS2CR12Q96Q35 445 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 POPDC2Q9HBU9 364 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 ABCC13Q9NSE7 274 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 HCFC1R1Q9NWW0 138 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.72■□□□□ 0.43
CMTM3-208ENST00000564247 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 TMEM59LQ9UK28 342 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 CDH7Q9ULB5 785 aa17.72■□□□□ 0.43
CMTM3-208ENST00000564247 ZNF638Q14966 1978 aaKnown RBP17.71■□□□□ 0.43
CMTM3-208ENST00000564247 GREB1Q4ZG55 1949 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 GJB6O95452 261 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 RALAP11233 206 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 PDGFRAP16234 1089 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 HMGA1P17096 107 aaKnown RBP17.71■□□□□ 0.43
CMTM3-208ENST00000564247 GPD1P21695 349 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 NOS2P35228 1153 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.43
CMTM3-208ENST00000564247 MESDQ14696 234 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 BEND5Q7L4P6 421 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 DEFB106AQ8N104 65 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 TRIM58Q8NG06 486 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 TPCN2Q8NHX9 752 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 JOSD2Q8TAC2 188 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 RNF139Q8WU17 664 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 RXFP2Q8WXD0 754 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 SMOC2Q9H3U7 446 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 RRN3Q9NYV6 651 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 SALL4Q9UJQ4 1053 aa17.71■□□□□ 0.43
CMTM3-208ENST00000564247 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 ANHXE9PGG2 379 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 DAB1O75553 588 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 FGF19O95750 216 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 RHOP08100 348 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 PSMA2P25787 234 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 SDC4P31431 198 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 MATKP42679 507 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 PIGHQ14442 188 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-208ENST00000564247 DCAF6Q58WW2 860 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 DAAM2Q86T65 1068 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 EMC1Q8N766 993 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 FNIP1Q8TF40 1166 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 UBE2Q2Q8WVN8 375 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 FGF13Q92913 245 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 PBXIP1Q96AQ6 731 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 PIWIL1Q96J94 861 aaKnown RBP17.7■□□□□ 0.42
CMTM3-208ENST00000564247 GCNAQ96QF7 691 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 NCAPGQ9BPX3 1015 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 CNPY3Q9BT09 278 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 GMIPQ9P107 970 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 STAP1Q9ULZ2 295 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
CMTM3-208ENST00000564247 HCN4Q9Y3Q4 1203 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms