RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 MAGED2Q9UNF1 606 aaPredicted RBP13.5□□□□□ -0.25
SPG7-209ENST00000564047 PATJQ8NI35 1801 aa13.5□□□□□ -0.25
SPG7-209ENST00000564047 A0A1W2PQH9 124 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 CAPN9O14815 690 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 PAPLNO95428 1278 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 PDGFRAP16234 1089 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 DESP17661 470 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 PSMA2P25787 234 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 SDC4P31431 198 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 SLC1A1P43005 524 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 PTPN9P43378 593 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 GNG11P61952 73 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 ZNF252P-AS1Q0IIN9 211 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 CCDC14Q49A88 953 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 BTBD8Q5XKL5 378 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 TMEM184AQ6ZMB5 413 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 DAAM2Q86T65 1068 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 ZNF276Q8N554 614 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.49□□□□□ -0.25
SPG7-209ENST00000564047 CASP10Q92851 521 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 NT5C3BQ969T7 300 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 NMUR1Q9HB89 426 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 STAP1Q9ULZ2 295 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 ALG6Q9Y672 507 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 ZNF318Q5VUA4 2279 aa13.49□□□□□ -0.25
SPG7-209ENST00000564047 TMEM110-MUSTN1A8MSY1 372 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 CCL16O15467 120 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 XYLBO75191 536 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 RFPL2O75678 378 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 RALAP11233 206 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 NCAM1P13591 858 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 HYAL1Q12794 435 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
SPG7-209ENST00000564047 DCAF6Q58WW2 860 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 TCEAL5Q5H9L2 206 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 SYPL2Q5VXT5 272 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 EFHBQ8N7U6 833 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 CMASQ8NFW8 434 aaPredicted RBP13.48□□□□□ -0.25
SPG7-209ENST00000564047 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
SPG7-209ENST00000564047 NPY6RQ99463 290 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 NCAPGQ9BPX3 1015 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 TRPM5Q9NZQ8 1165 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 NAALADL1Q9UQQ1 740 aa13.48□□□□□ -0.25
SPG7-209ENST00000564047 PLXNA3P51805 1871 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 ZNF840PA6NDX5 716 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 RNF8O76064 485 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 ENDOD1O94919 500 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 SLU7O95391 586 aaKnown RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 FGF19O95750 216 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 F11P03951 625 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 SRGAP2BP0DMP2 458 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 RARGP13631 454 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 PTPN2P17706 415 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 COMTP21964 271 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 PGFP49763 221 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 SULT1E1P49888 294 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 EPHA5P54756 1037 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 LEXMQ3ZCV2 418 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 MSANTD2Q6P1R3 559 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 STRADAQ7RTN6 431 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 PEX26Q7Z412 305 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 BNIPLQ7Z465 357 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 LEMD2Q8NC56 503 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 VN1R2Q8NFZ6 395 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 RNF139Q8WU17 664 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 EDEM1Q92611 657 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 PGAP3Q96FM1 320 aaPredicted RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 GOLPH3Q9H4A6 298 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 UBE2ZQ9H832 354 aaPredicted RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 SFXN1Q9H9B4 322 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 IL21Q9HBE4 155 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 ZNF334Q9HCZ1 680 aaPredicted RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 OLA1Q9NTK5 396 aaKnown RBP13.47□□□□□ -0.25
SPG7-209ENST00000564047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPG7-209ENST00000564047 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
SPG7-209ENST00000564047 ZDBF2Q9HCK1 2354 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 SPOPO43791 374 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 TADA3O75528 432 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 F9P00740 461 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 CDC25CP30307 473 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 PCK1P35558 622 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 TUBP50607 506 aa13.46□□□□□ -0.25
SPG7-209ENST00000564047 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms