RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NTPCRQ9BSD7 190 aaKnown RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 SSU72Q9NP77 194 aaKnown RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 CCL15-CCL14A0A0B4J2E2 113 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 KBTBD13C9JR72 458 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 H3BRJ5 948 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 MAFO75444 373 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 PENKP01210 267 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 LYNP07948 512 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 DSG1Q02413 1049 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 STX3Q13277 289 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 THOC5Q13769 683 aaKnown RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 CHI3L2Q15782 390 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 CCL15Q16663 113 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 KYAT1Q16773 422 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 TMEM63BQ5T3F8 832 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 FOXB2Q5VYV0 432 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 CCNYL1Q8N7R7 359 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 C12orf29Q8N999 325 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 STKLD1Q8NE28 680 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 LMO3Q8TAP4 145 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 SPATA16Q9BXB7 569 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 SHCBP1LQ9BZQ2 653 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 ZCWPW1Q9H0M4 648 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 SLC24A2Q9UI40 661 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 TMEM191CA6NGB0 347 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 FARP2O94887 1054 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 UBTFL6P0CB48 400 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 DEUP1Q05D60 604 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 MMEL1Q495T6 779 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 DENND5BQ6ZUT9 1274 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 RYBPQ8N488 228 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 RNF139Q8WU17 664 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 NRG4Q8WWG1 115 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 CDT1Q9H211 546 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 DDX43Q9NXZ2 648 aaKnown RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 B2RBV5 119 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 F8W8V4 182 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 CYP2B6P20813 491 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 CACNB2Q08289 660 aaPredicted RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 FASTKD3Q14CZ7 662 aaKnown RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 RPS6KA2Q15349 733 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 CNPY1Q3B7I2 92 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 SLC39A4Q6P5W5 647 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 C2orf69Q8N8R5 385 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 SLC7A14Q8TBB6 771 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 DDX27Q96GQ7 796 aaKnown RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 PDGFCQ9NRA1 345 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 BARX2Q9UMQ3 279 aaPredicted RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 SSX2IPQ9Y2D8 614 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 LAMB2P55268 1798 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 LOC100653049A0A140TA62 436 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 GIPC1O14908 333 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 KRT34O76011 436 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 BGNP21810 368 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 RPL22P35268 128 aaKnown RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 TPI1P60174 286 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 AP2B1P63010 937 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 SP2Q02086 613 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 KRT72Q14CN4 511 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 ZNF484Q5JVG2 852 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 MON1BQ7L1V2 547 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.81□□□□□ -0.68
RNF40-204ENST00000563683 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 RNF135Q8IUD6 432 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 AFAP1L2Q8N4X5 818 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 PHC3Q8NDX5 983 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 E2F7Q96AV8 911 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 DHX33Q9H6R0 707 aaKnown RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 GPRC5DQ9NZD1 345 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 TELO2Q9Y4R8 837 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 CNTNAP1P78357 1384 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 A0A1B0GVG6 124 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 M0QYT0 321 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 UNGP13051 313 aaPredicted RBP10.81□□□□□ -0.68
RNF40-204ENST00000563683 RBL1P28749 1068 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 ADCYAP1R1P41586 468 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 SLC26A2P50443 739 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 POU5F1BQ06416 359 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 RASA2Q15283 850 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 DGKDQ16760 1214 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 PTPN20Q4JDL3 420 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 LIN52Q52LA3 116 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 ANKS1BQ7Z6G8 1248 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 RIOX2Q8IUF8 465 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 LZICQ8WZA0 190 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 NCSTNQ92542 709 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 THTPAQ9BU02 230 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 WWP1Q9H0M0 922 aa10.81□□□□□ -0.68
RNF40-204ENST00000563683 hCG_1818297A0A087WSY0 165 aa10.8□□□□□ -0.68
RNF40-204ENST00000563683 A0A1W2PPM1 405 aa10.8□□□□□ -0.68
RNF40-204ENST00000563683 DNAJC6O75061 913 aa10.8□□□□□ -0.68
RNF40-204ENST00000563683 C6orf222P0C671 652 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms