RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CPB1P15086 417 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 L1CAMP32004 1257 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 RDXP35241 583 aaKnown RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 MAGEA11P43364 429 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 PGFP49763 221 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 DRG2P55039 364 aaKnown RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 DEUP1Q05D60 604 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 NME3Q13232 169 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 DRICH1Q6PGQ1 229 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 MAP7D3Q8IWC1 876 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 EIF1ADQ8N9N8 165 aaKnown RBP18.8■□□□□ 0.6
COMMD4-208ENST00000563220 C8orf48Q96LL4 319 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 RNF157Q96PX1 679 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 CRISPLD1Q9H336 500 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 FAM114A2Q9NRY5 505 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 FZD10Q9ULW2 581 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 AP4E1Q9UPM8 1137 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 SLC27A5Q9Y2P5 690 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 NEU2Q9Y3R4 380 aa18.8■□□□□ 0.6
COMMD4-208ENST00000563220 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 ADAM12O43184 909 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 KRT17Q04695 432 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 BTG3Q14201 252 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 HLTFQ14527 1009 aaKnown RBP eCLIP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 CASP8Q14790 479 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 DPYSL2Q16555 572 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 SND1Q7KZF4 910 aaKnown RBP eCLIP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 HDXQ7Z353 690 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 ACTL9Q8TC94 416 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 CCDC114Q96M63 670 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 KCTD15Q96SI1 283 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 DHX35Q9H5Z1 703 aaKnown RBP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 WDR6Q9NNW5 1121 aaKnown RBP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 TMPRSS4Q9NRS4 437 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 PRDM4Q9UKN5 801 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 MRPL42Q9Y6G3 142 aaKnown RBP18.79■□□□□ 0.6
COMMD4-208ENST00000563220 PTPRDP23468 1912 aa18.79■□□□□ 0.6
COMMD4-208ENST00000563220 SOAT2O75908 522 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 BAIAP3O94812 1187 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 RPL21P46778 160 aaKnown RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 OTUD4Q01804 1114 aaKnown RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 BYSLQ13895 437 aaKnown RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 PPP1R7Q15435 360 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 ANKRD20A8PQ5CZ79 823 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 PPP6R3Q5H9R7 873 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 EMBQ6PCB8 327 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 SCD5Q86SK9 330 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 SLC39A11Q8N1S5 342 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 PYROXD2Q8N2H3 581 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 PQLC3Q8N755 202 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 FBXO22Q8NEZ5 403 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 PCDH19Q8TAB3 1148 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 GRK7Q8WTQ7 553 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 RIN2Q8WYP3 895 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 MAK16Q9BXY0 300 aaKnown RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 FEZ2Q9UHY8 353 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-208ENST00000563220 CDY1Q9Y6F8 540 aa18.78■□□□□ 0.6
COMMD4-208ENST00000563220 TRIM66O15016 1216 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 RPL17P18621 184 aaKnown RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 TRIP13Q15645 432 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 OASLQ15646 514 aaKnown RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 CMTR2Q8IYT2 770 aaKnown RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 NUP93Q8N1F7 819 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 SLC35B2Q8TB61 432 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 GPR152Q8TDT2 470 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 BADQ92934 168 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 CAVIN3Q969G5 261 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 FAF2Q96CS3 445 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 PGAP3Q96FM1 320 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 ZNF558Q96NG5 402 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 OXCT2Q9BYC2 517 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 GRHL1Q9NZI5 618 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 MTRRQ9UBK8 725 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 DRG1Q9Y295 367 aaKnown RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 PECAM1P16284 738 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 VCPP55072 806 aaKnown RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 YWHAGP61981 247 aaKnown RBP eCLIP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 USP46P62068 366 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 NPNTQ6UXI9 565 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 PRUNE1Q86TP1 453 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 VSIG1Q86XK7 387 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 SPPL2BQ8TCT7 592 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 PIK3R5Q8WYR1 880 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 NKD2Q969F2 451 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-208ENST00000563220 ZNF670Q9BS34 389 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 ANLNQ9NQW6 1124 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 RRN3Q9NYV6 651 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 ZNF148Q9UQR1 794 aa18.77■□□□□ 0.6
COMMD4-208ENST00000563220 I6L893 689 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-208ENST00000563220 APOC4-APOC2K7ER74 178 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 APOC2P02655 101 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 SOD2P04179 222 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 SMARCB1Q12824 385 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 DUSP4Q13115 394 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 PTK6Q13882 451 aa18.76■□□□□ 0.59
COMMD4-208ENST00000563220 TFDP2Q14188 446 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms