RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 MIA3Q5JRA6 1907 aa17.5■□□□□ 0.39
CLK3-207ENST00000562389 A0A1W2PQJ5 194 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 KANSL1LA0AUZ9 987 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 SHISA7A6NL88 538 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 LRRC53A6NM62 1247 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 MAN2B1O00754 1011 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 GREM1O60565 184 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 NFATC1O95644 943 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 ERBB2P04626 1255 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 CYP1A1P04798 512 aaPredicted RBP17.49■□□□□ 0.39
CLK3-207ENST00000562389 IRF1P10914 325 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 CHRNB2P17787 502 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 KPNA1P52294 538 aaPredicted RBP17.49■□□□□ 0.39
CLK3-207ENST00000562389 ARID5AQ03989 594 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 TRIM72Q6ZMU5 477 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 HTR3DQ70Z44 454 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 MIB1Q86YT6 1006 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 CPA6Q8N4T0 437 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 FLCNQ8NFG4 579 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 WBP2Q969T9 261 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 OTUB2Q96DC9 234 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 LINC00597Q9H2U6 94 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 ECT2Q9H8V3 914 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 ASNSD1Q9NWL6 643 aa17.49■□□□□ 0.39
CLK3-207ENST00000562389 LSM7Q9UK45 103 aaKnown RBP17.49■□□□□ 0.39
CLK3-207ENST00000562389 ITIH6Q6UXX5 1313 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 STC2O76061 302 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 GLI1P08151 1106 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 CTHP32929 405 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 GABRB2P47870 512 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 CLCN5P51795 746 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 ASTLQ6HA08 431 aaPredicted RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 OLFML1Q6UWY5 402 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 ZNF852Q6ZMS4 543 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 FAM183BPQ6ZVS7 135 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 IRF2BP2Q7Z5L9 587 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 RALGPS2Q86X27 583 aaPredicted RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 ZDHHC17Q8IUH5 632 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 MSANTD4Q8NCY6 345 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 FAM149B1Q96BN6 582 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 PIWIL1Q96J94 861 aaKnown RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 SYNCQ9H7C4 482 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 POPDC2Q9HBU9 364 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 LTB4R2Q9NPC1 389 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 AIPL1Q9NZN9 384 aa17.48■□□□□ 0.39
CLK3-207ENST00000562389 HBS1LQ9Y450 684 aaKnown RBP17.48■□□□□ 0.39
CLK3-207ENST00000562389 SLC12A8A0AV02 714 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 SPECC1L-ADORA2AF8WAN1 911 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 FYNP06241 537 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 NCAM1P13591 858 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 AOC1P19801 751 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 SOX9P48436 509 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 YWHAZP63104 245 aaKnown RBP17.47■□□□□ 0.39
CLK3-207ENST00000562389 EFHC1Q5JVL4 640 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 SFMBT2Q5VUG0 894 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 NAA35Q5VZE5 725 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 Q6ZNB5 142 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 TOGARAM2Q6ZUX3 1019 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 ERICH1Q86X53 443 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 BBS7Q8IWZ6 715 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 ADGRG2Q8IZP9 1017 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 ZNF397Q8NF99 534 aaPredicted RBP17.47■□□□□ 0.39
CLK3-207ENST00000562389 PJA1Q8NG27 643 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 TTC8Q8TAM2 541 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 FAM3CQ92520 227 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 AGPAT1Q99943 283 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 OSBPL6Q9BZF3 934 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 SFMBT1Q9UHJ3 866 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 ZNF510Q9Y2H8 683 aa17.47■□□□□ 0.39
CLK3-207ENST00000562389 MRPS17Q9Y2R5 130 aaKnown RBP17.47■□□□□ 0.39
CLK3-207ENST00000562389 STK25O00506 426 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
CLK3-207ENST00000562389 HSF2BPO75031 334 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 CYP17A1P05093 508 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 UNGP13051 313 aaPredicted RBP17.46■□□□□ 0.39
CLK3-207ENST00000562389 SCNN1AP37088 669 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 PRKCIP41743 596 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 AMPD2Q01433 879 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SLC6A3Q01959 620 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 NR1H3Q13133 447 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 NNTQ13423 1086 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 TRIP4Q15650 581 aaPredicted RBP17.46■□□□□ 0.39
CLK3-207ENST00000562389 ASIC2Q16515 512 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SLC26A9Q7LBE3 791 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 CPA5Q8WXQ8 436 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 C18orf8Q96DM3 657 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 CHFRQ96EP1 664 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SLC2A13Q96QE2 648 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 PCDHB18PQ96TA0 734 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 NELL2Q99435 816 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 SYT11Q9BT88 431 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 FOXQ1Q9C009 403 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
CLK3-207ENST00000562389 NUCKS1Q9H1E3 243 aaKnown RBP17.46■□□□□ 0.39
CLK3-207ENST00000562389 NAALADL1Q9UQQ1 740 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms