RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 A0A1W2PQ27 194 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 A0A1W2PQ64 194 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 A0A1W2PQD8 194 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 GFRA2O00451 464 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 GIPC1O14908 333 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 CYP26A1O43174 497 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 C7P10643 843 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 TYRP14679 529 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 NR2F2P24468 414 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 PLA2G4AP47712 749 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
HERC2-202ENST00000562136 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
HERC2-202ENST00000562136 LMAN2Q12907 356 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 C10orf76Q5T2E6 689 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 CEP135Q66GS9 1140 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 GRAMD4Q6IC98 578 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 HMGB4Q8WW32 186 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 PIGKQ92643 395 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
HERC2-202ENST00000562136 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 DNMT3LQ9UJW3 386 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 DMXL2Q8TDJ6 3036 aa13.21□□□□□ -0.29
HERC2-202ENST00000562136 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 PRRT4C9JH25 899 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 STC2O76061 302 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 PENKP01210 267 aaPredicted RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 ACO1P21399 889 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 ADORA2BP29275 332 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 SYKP43405 635 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 GCLMP48507 274 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 NDUFA8P51970 172 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 ENPP2Q13822 863 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 ANO4Q32M45 955 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 EDRF1Q3B7T1 1238 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 TRIM61Q5EBN2 209 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 EGFLAMQ63HQ2 1017 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 METTL3Q86U44 580 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 XPO6Q96QU8 1125 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 ACOX2Q99424 681 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 BBS2Q9BXC9 721 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 NACA2Q9H009 215 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 CAPN10Q9HC96 672 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 LSM7Q9UK45 103 aaKnown RBP13.2□□□□□ -0.3
HERC2-202ENST00000562136 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
HERC2-202ENST00000562136 PKD1L2Q7Z442 2459 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 IGHV1OR15-9A0A0B4J2B8 117 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 MAP3K13O43283 966 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 AP5Z1O43299 807 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 ZNF217O75362 1048 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 KLKB1P03952 638 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 PROS1P07225 676 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 TRIM49P0CI25 452 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 TRIM49CP0CI26 452 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 IRF1P10914 325 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 RARGP13631 454 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 HOXB2P14652 356 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 RPL13P26373 211 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 KRT85P78386 507 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 SEMA3BQ13214 749 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 ADAM9Q13443 819 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 PPP1R26Q5T8A7 1209 aaPredicted RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 KIAA1211LQ6NV74 962 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 FAM186BQ8IYM0 893 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
HERC2-202ENST00000562136 IMPG2Q9BZV3 1241 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■■■ 96.1
HERC2-202ENST00000562136 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
HERC2-202ENST00000562136 KNL1Q8NG31 2342 aa13.19□□□□□ -0.3
HERC2-202ENST00000562136 NPC1O15118 1278 aa13.18□□□□□ -0.3
HERC2-202ENST00000562136 SERPINF2P08697 491 aa13.18□□□□□ -0.3
HERC2-202ENST00000562136 ENGP17813 658 aa13.18□□□□□ -0.3
HERC2-202ENST00000562136 NDUFV2P19404 249 aa13.18□□□□□ -0.3
HERC2-202ENST00000562136 ITPKAP23677 461 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms