RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HPS4Q9NQG7 708 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 ST7Q9NRC1 585 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 STOML2Q9UJZ1 356 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 TMEM59LQ9UK28 342 aa14.05□□□□□ -0.16
CDH1-204ENST00000562118 LUC7L2Q9Y383 392 aaKnown RBP14.05□□□□□ -0.16
CDH1-204ENST00000562118 BZW2Q9Y6E2 419 aaKnown RBP14.05□□□□□ -0.16
CDH1-204ENST00000562118 GFRA2O00451 464 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 PIK3R2O00459 728 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 DDX3XO00571 662 aaKnown RBP eCLIP14.04□□□□□ -0.16
CDH1-204ENST00000562118 HSF2BPO75031 334 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 MFAP3LO75121 409 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 DAB1O75553 588 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 STC2O76061 302 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 MBL2P11226 248 aaPredicted RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 ZNF75DP51815 510 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 YWHAZP63104 245 aaKnown RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 RING1Q06587 406 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 GRM2Q14416 872 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 PDGFRLQ15198 375 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 ASTE1Q2TB18 679 aaPredicted RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 EML3Q32P44 896 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 IER5LQ5T953 404 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 OTUD1Q5VV17 481 aaPredicted RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 PPP1R2P3Q6NXS1 205 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 IPO4Q8TEX9 1081 aaKnown RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 CPA5Q8WXQ8 436 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 WBP2Q969T9 261 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 OTUB2Q96DC9 234 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 MSANTD3Q96H12 275 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 SLC39A13Q96H72 371 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 VCPIP1Q96JH7 1222 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 HBS1LQ9Y450 684 aaKnown RBP14.04□□□□□ -0.16
CDH1-204ENST00000562118 F5P12259 2224 aa14.04□□□□□ -0.16
CDH1-204ENST00000562118 MIA3Q5JRA6 1907 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ZNF318Q5VUA4 2279 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 KRBA1A5PL33 1030 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
CDH1-204ENST00000562118 DPYSL4O14531 572 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ZNF263O14978 683 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 MDM4O15151 490 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 LATS1O95835 1130 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ABL1P00519 1130 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 SERPING1P05155 500 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 FECHP22830 423 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 GDI1P31150 447 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 STARD6P59095 220 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 COG7P83436 770 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 CDK17Q00537 523 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ARID5AQ03989 594 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 PRKCQQ04759 706 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
CDH1-204ENST00000562118 TAF5Q15542 800 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 GAB4Q2WGN9 574 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 C10orf120Q5SQS8 335 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ERICH1Q86X53 443 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 MSANTD4Q8NCY6 345 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 DQX1Q8TE96 717 aaKnown RBP14.03□□□□□ -0.16
CDH1-204ENST00000562118 PLD4Q96BZ4 506 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 PGAP3Q96FM1 320 aaPredicted RBP14.03□□□□□ -0.16
CDH1-204ENST00000562118 ISCUQ9H1K1 167 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 EPHX3Q9H6B9 360 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 GKN1Q9NS71 199 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ABHD10Q9NUJ1 306 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 THG1LQ9NWX6 298 aaKnown RBP14.03□□□□□ -0.16
CDH1-204ENST00000562118 MARCH2Q9P0N8 246 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 ARHGAP20Q9P2F6 1191 aa14.03□□□□□ -0.16
CDH1-204ENST00000562118 MYOFQ9NZM1 2061 aa14.02□□□□□ -0.16
CDH1-204ENST00000562118 GPR37L1O60883 481 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 KLKB1P03952 638 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 CDC25BP30305 580 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 KPNA1P52294 538 aaPredicted RBP14.02□□□□□ -0.17
CDH1-204ENST00000562118 SYPL2Q5VXT5 272 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 RNF43Q68DV7 783 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 ACAD10Q6JQN1 1059 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 TRNP1Q6NT89 227 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 GPIHBP1Q8IV16 184 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 ADGRG2Q8IZP9 1017 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 OR8K1Q8NGG5 319 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 EDEM1Q92611 657 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 ATP2A3Q93084 1043 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 AZIN2Q96A70 460 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 NPY6RQ99463 290 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 ADAM33Q9BZ11 813 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 ARHGEF3Q9NR81 526 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 TMEM51Q9NW97 253 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 SMPD4Q9NXE4 827 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 TAS2R14Q9NYV8 317 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 CFAP97Q9P2B7 532 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 WDR35Q9P2L0 1181 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 TBC1D14Q9P2M4 693 aa14.02□□□□□ -0.17
CDH1-204ENST00000562118 NUDT5Q9UKK9 219 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms