RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 TRMT13Q9NUP7 481 aaKnown RBP13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
AC055717.2-201ENST00000561864 CEP350Q5VT06 3117 aa13.15□□□□□ -0.31
AC055717.2-201ENST00000561864 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 H3BRJ5 948 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 TYMPP19971 482 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PHBP35232 272 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 ARL4AP40617 200 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 MAGEA6P43360 314 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 MAP3K7CLP57077 242 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PDIA2Q13087 525 aaKnown RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 RASA2Q15283 850 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 MAPRE1Q15691 268 aaKnown RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SKIDA1Q1XH10 827 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 RAB41Q5JT25 222 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 OTUD1Q5VV17 481 aaPredicted RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 DCLRE1AQ6PJP8 1040 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SCML4Q8N228 414 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 CCDC185Q8N715 623 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 IRGQQ8WZA9 623 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 QKIQ96PU8 341 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 CSPG4P5Q96PW8 444 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SMOQ99835 787 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 TRIM62Q9BVG3 475 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 OSBPL7Q9BZF2 842 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 POPDC2Q9HBU9 364 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 RGS18Q9NS28 235 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 MTMR10Q9NXD2 777 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 CACNG4Q9UBN1 327 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 FETUBQ9UGM5 382 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PRDM4Q9UKN5 801 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 ACTL7BQ9Y614 415 aa13.14□□□□□ -0.31
AC055717.2-201ENST00000561864 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 HACD1B0YJ81 288 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 E7EVH7 732 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 NDUFAB1O14561 156 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 BEST1O76090 585 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 EOMESO95936 686 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 POMCP01189 267 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 CKBP12277 381 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 PRMT2P55345 433 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 KCNJ11Q14654 390 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ARHGEF6Q15052 776 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 DCAF6Q58WW2 860 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 FAM171BQ6P995 826 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 GLB1LQ6UWU2 654 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ZC3H18Q86VM9 953 aaKnown RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 NLRP14Q86W24 1093 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ZBED8Q8IZ13 594 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 RSPH1Q8WYR4 309 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ARHGEF2Q92974 986 aaKnown RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 SUSD3Q96L08 255 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 XPO6Q96QU8 1125 aaKnown RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 CCDC134Q9H6E4 229 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 C10orf88Q9H8K7 445 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 USP29Q9HBJ7 922 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 PNPLA8Q9NP80 782 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 EURLQ9NYK6 297 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 SLC24A2Q9UI40 661 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 HEY1Q9Y5J3 304 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
AC055717.2-201ENST00000561864 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
AC055717.2-201ENST00000561864 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
AC055717.2-201ENST00000561864 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
AC055717.2-201ENST00000561864 KCNN4O15554 427 aa13.12□□□□□ -0.31
AC055717.2-201ENST00000561864 B3GAT3O94766 335 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms