RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 FAM71BQ8TC56 605 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 IPO4Q8TEX9 1081 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 CLEC4CQ8WTT0 213 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 MAGOHBQ96A72 148 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 SCYL1Q96KG9 808 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 SMOQ99835 787 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 SYT15Q9BQS2 421 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 ERP44Q9BS26 406 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TRIM51Q9BSJ1 452 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 HTATIP2Q9BUP3 242 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 DDX23Q9BUQ8 820 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 FTHL17Q9BXU8 183 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TXLNGYQ9BZA5 131 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TGIF2Q9GZN2 237 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 PLEKHA4Q9H4M7 779 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 VIPAS39Q9H9C1 493 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 CAPN10Q9HC96 672 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 CSNK1G1Q9HCP0 422 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 CHST7Q9NS84 486 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 ZDHHC18Q9NUE0 388 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TBC1D13Q9NVG8 400 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TMLHEQ9NVH6 421 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TMEM161AQ9NX61 479 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 DDX43Q9NXZ2 648 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 GRHL1Q9NZI5 618 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 OGFRQ9NZT2 677 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 HESX1Q9UBX0 185 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 FAM153AQ9UHL3 310 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 CDH9Q9ULB4 789 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 ZMYND8Q9ULU4 1186 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 NOVA2Q9UNW9 492 aaKnown RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 EFR3BQ9Y2G0 817 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 TIMM13Q9Y5L4 95 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-210ENST00000561817 PATJQ8NI35 1801 aa6.84□□□□□ -1.31
CAPN3-210ENST00000561817 VWA8A3KMH1 1905 aa6.84□□□□□ -1.32
CAPN3-210ENST00000561817 GBF1Q92538 1859 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 GOLGA6L10A0A0M3HER8 536 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 PI4K2BG5E9Z4 385 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 DAPK3O43293 454 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 RRP9O43818 475 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 ATP9BO43861 1147 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 B3GAT3O94766 335 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 EFEMP2O95967 443 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 KRT1P04264 644 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 S100BP04271 92 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 FYNP06241 537 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CD48P09326 243 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 KRT10P13645 584 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 PDGFRAP16234 1089 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 SYN1P17600 705 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 KDELR1P24390 212 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 IL4RP24394 825 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 SOX11P35716 441 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 ACADSBP45954 432 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 KCNJ1P48048 391 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 EPHB4P54760 987 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 GYS2P54840 703 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 HDAC4P56524 1084 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 DR1Q01658 176 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CUL1Q13616 776 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 LLGL1Q15334 1064 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 NR6A1Q15406 480 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CCNG2Q16589 344 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 LRRC26Q2I0M4 334 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 C15orf59Q2T9L4 293 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 INTS6LQ5JSJ4 861 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 EMBQ6PCB8 327 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 DRICH1Q6PGQ1 229 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CCDC137Q6PK04 289 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 GLB1LQ6UWU2 654 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 DSTYKQ6XUX3 929 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 Q6ZVU0 165 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 GPRIN1Q7Z2K8 1008 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 HDXQ7Z353 690 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 FAM35AQ86V20 835 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 LRRTM3Q86VH5 581 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 TSEN2Q8NCE0 465 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CCDC26Q8TAB7 109 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 MAIP1Q8WWC4 291 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 ATG4AQ8WYN0 398 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 NDRG1Q92597 394 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 NT5C3BQ969T7 300 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 ACSF2Q96CM8 615 aaPredicted RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 PCED1BQ96HM7 432 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 RBM41Q96IZ5 413 aaKnown RBP6.83□□□□□ -1.32
CAPN3-210ENST00000561817 RUNDC3BQ96NL0 473 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 TOX2Q96NM4 488 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 CASD1Q96PB1 797 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 SLC2A13Q96QE2 648 aa6.83□□□□□ -1.32
CAPN3-210ENST00000561817 TMEM209Q96SK2 561 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms