RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 IGHV1OR15-9A0A0B4J2B8 117 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 TBC1D3BA6NDS4 549 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 PDXKO00764 312 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 IKBKBO14920 756 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 MAPK13O15264 365 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 POLR2DO15514 142 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 AP5Z1O43299 807 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 ACTN4O43707 911 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 GJB3O75712 270 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 BEST1O76090 585 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 ABL1P00519 1130 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SERPINF2P08697 491 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SLFN14P0C7P3 912 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 ITPKAP23677 461 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 CASP1P29466 404 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 PSEN1P49768 467 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 STK4Q13043 487 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 CUL4BQ13620 913 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 ENPP2Q13822 863 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 NFIL3Q16649 462 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 C10orf76Q5T2E6 689 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 BTBD8Q5XKL5 378 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 TMEFF1Q8IYR6 380 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 FRMD1Q8N878 549 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 HMGB4Q8WW32 186 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 P2RY11Q96G91 374 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 HNRNPABQ99729 332 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 BLZF1Q9H2G9 400 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 TLR8Q9NR97 1041 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 DNAAF2Q9NVR5 837 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 OSER1Q9NX31 292 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 HMGXB4Q9UGU5 601 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 CHORDC1Q9UHD1 332 aaPredicted RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 SH3BP1Q9Y3L3 701 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 NFE2L3Q9Y4A8 694 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 PCDHA5Q9Y5H7 936 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 PLXND1Q9Y4D7 1925 aa8.87□□□□□ -0.99
PALB2-202ENST00000561514 DSPP15924 2871 aaKnown RBP8.87□□□□□ -0.99
PALB2-202ENST00000561514 ITPR1Q14643 2758 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ATG2BQ96BY7 2078 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 TRIM24O15164 1050 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 PHACTR2O75167 634 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ZNF217O75362 1048 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 TOP3BO95985 862 aaKnown RBP8.86□□□□□ -0.99
PALB2-202ENST00000561514 PENKP01210 267 aaPredicted RBP8.86□□□□□ -0.99
PALB2-202ENST00000561514 CAPNS1P04632 268 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 MYL1P05976 194 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 CISD3P0C7P0 127 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 P4HA1P13674 534 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 CCDC130P13994 396 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 HOXB2P14652 356 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 NDUFV2P19404 249 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 NDST1P52848 882 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 DLG4P78352 724 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 FOXC1Q12948 553 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 BIRC3Q13489 604 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 DUOXA1Q1HG43 343 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SGSM1Q2NKQ1 1148 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 EGFLAMQ63HQ2 1017 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 GRAMD4Q6IC98 578 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SCARA5Q6ZMJ2 495 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 CLEC20AQ6ZU45 233 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 GPRIN1Q7Z2K8 1008 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ACOT1Q86TX2 421 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SLC41A1Q8IVJ1 513 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 DEFB124Q8NES8 71 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SNX21Q969T3 373 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ZNF419Q96HQ0 510 aaPredicted RBP8.86□□□□□ -0.99
PALB2-202ENST00000561514 TIGD1Q96MW7 591 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 TWNKQ96RR1 684 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SCNM1Q9BWG6 230 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SLC32A1Q9H598 525 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 CYP3A43Q9HB55 503 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
PALB2-202ENST00000561514 WDR35Q9P2L0 1181 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 PCDHA7Q9UN72 937 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 TRAF3IP3Q9Y228 551 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 SLC27A6Q9Y2P4 619 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 MSRB2Q9Y3D2 182 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 USP3Q9Y6I4 520 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 PCDH15Q96QU1 1955 aa8.86□□□□□ -0.99
PALB2-202ENST00000561514 ATXN2Q99700 1313 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 APC2O95996 2303 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 FREM2Q5SZK8 3169 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 FAM237AA0A1B0GTK4 181 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 PCNX2A6NKB5 2137 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 PRRT4C9JH25 899 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 H0Y626 953 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 ARHGAP33O14559 1287 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 NPC1O15118 1278 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms