RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZNF354CQ86Y25 554 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 ARHGEF19Q8IW93 802 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 SLC15A3Q8IY34 581 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 SMAP1Q8IYB5 467 aaPredicted RBP4.35□□□□□ -1.71
HERC1-215ENST00000561436 LCORLQ8N3X6 602 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 VGLL2Q8N8G2 317 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 CYP2W1Q8TAV3 490 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 BPIFB1Q8TDL5 484 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 PAGR1Q9BTK6 254 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 CDK19Q9BWU1 502 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.35□□□□□ -1.712e-7■■■□□ 15.1
HERC1-215ENST00000561436 CYP4F11Q9HBI6 524 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 NECTIN3Q9NQS3 549 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 INTS13Q9NVM9 706 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 TMOD4Q9NZQ9 345 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 CTTNBP2NLQ9P2B4 639 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 TESQ9UGI8 421 aaKnown RBP4.35□□□□□ -1.71
HERC1-215ENST00000561436 CDY1Q9Y6F8 540 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 MORC2Q9Y6X9 1032 aaPredicted RBP4.35□□□□□ -1.71
HERC1-215ENST00000561436 ACEP12821 1306 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 WDR17Q8IZU2 1322 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 TULP4Q9NRJ4 1543 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 CLTCL1P53675 1640 aa4.35□□□□□ -1.71
HERC1-215ENST00000561436 DCLK1O15075 740 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 RRP9O43818 475 aaKnown RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 CCNT2O60583 730 aaKnown RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 NBNO60934 754 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 COQ9O75208 318 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 SUN1O94901 812 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CSTBP04080 98 aaKnown RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 A1BGP04217 495 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 BMPR1AP36894 532 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 HALP42357 657 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 GRK6P43250 576 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CCT5P48643 541 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 PTH2RP49190 550 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 DGKEP52429 567 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ZNF134P52741 427 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 MC2RQ01718 297 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CYP2A13Q16696 494 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ZACNQ401N2 412 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 C4orf46Q504U0 113 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CERCAMQ5T4B2 595 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 TEDDM1Q5T9Z0 273 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ARHGAP40Q5TG30 622 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 FAXCQ5TGI0 409 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ICE2Q659A1 982 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 SP5Q6BEB4 398 aaPredicted RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 PLAG1Q6DJT9 500 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 MRNIPQ6NTE8 343 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CCDC174Q6PII3 467 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ZDHHC24Q6UX98 284 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 RFX8Q6ZV50 586 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 TOM1L2Q6ZVM7 507 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ARHGEF25Q86VW2 580 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 TTC30AQ86WT1 665 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 GATAD2AQ86YP4 633 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ADGRG5Q8IZF4 528 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CPXCR1Q8N123 301 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 MYRIPQ8NFW9 859 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 LRIG1Q96JA1 1093 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 Q96MF0 132 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 OSBPL9Q96SU4 736 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 RMDN3Q96TC7 470 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 MYLK2Q9H1R3 596 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 SLITRK6Q9H5Y7 841 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 ZBTB26Q9HCK0 441 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 AGO4Q9HCK5 861 aaKnown RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 GJB4Q9NTQ9 266 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 TBCCD1Q9NVR7 557 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 RGL1Q9NZL6 768 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 C11orf21Q9P2W6 132 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 CAPN11Q9UMQ6 739 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 TTC21AQ8NDW8 1320 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 WDR33Q9C0J8 1336 aaKnown RBP4.34□□□□□ -1.71
HERC1-215ENST00000561436 CCDC7Q96M83 1385 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 COL4A3Q01955 1670 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 NALCNQ8IZF0 1738 aa4.34□□□□□ -1.71
HERC1-215ENST00000561436 FAM234BA2RU67 622 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 SNX2O60749 519 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 SRGAP2O75044 1071 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 TYRP1P17643 537 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 BMP5P22003 454 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 PDE6CP51160 858 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 VAV2P52735 878 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 ITGA8P53708 1063 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 POLE2P56282 527 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 MYO1EQ12965 1108 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 BIRC3Q13489 604 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 GPR162Q16538 588 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 CD300EQ496F6 205 aaPredicted RBP4.33□□□□□ -1.72
HERC1-215ENST00000561436 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.33□□□□□ -1.72
HERC1-215ENST00000561436 RBM20Q5T481 1227 aaKnown RBP4.33□□□□□ -1.72
HERC1-215ENST00000561436 RGS7BPQ6MZT1 257 aaPredicted RBP4.33□□□□□ -1.72
HERC1-215ENST00000561436 TLDC1Q6P9B6 456 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 B3GALNT2Q8NCR0 500 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 ZNF384Q8TF68 577 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 PPP2R3CQ969Q6 453 aa4.33□□□□□ -1.72
HERC1-215ENST00000561436 FAM136AQ96C01 138 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms