RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 FMNL3Q8IVF7 1028 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 C1orf131Q8NDD1 294 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 KCTD13Q8WZ19 329 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CD101Q93033 1021 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 EXOC4Q96A65 974 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 FAM122AQ96E09 287 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 ZFRQ96KR1 1074 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 NOX5Q96PH1 765 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CDK5RAP1Q96SZ6 601 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 P2RY13Q9BPV8 354 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 DDX23Q9BUQ8 820 aaKnown RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
HERC1-212ENST00000561348 STK33Q9BYT3 514 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CYLDQ9NQC7 956 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CNGB3Q9NQW8 809 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 ABCC13Q9NSE7 274 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CLIC5Q9NZA1 410 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 TBC1D14Q9P2M4 693 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 CNTN6Q9UQ52 1028 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 F5P12259 2224 aa10.6□□□□□ -0.71
HERC1-212ENST00000561348 MYOFQ9NZM1 2061 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 NEDD8-MDP1E9PL57 170 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 TRDMT1O14717 391 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 EPHB6O15197 1021 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 TEX33O43247 280 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 TSPAN3O60637 253 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 GABBR2O75899 941 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 EGFP01133 1207 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 ADH5P11766 374 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 CYP11B1P15538 503 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 CORO1AP31146 461 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 ACADSBP45954 432 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 SLC6A11P48066 632 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PTPN5P54829 565 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 RNASE9P60153 205 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 COG7P83436 770 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 MTAPQ13126 283 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PDCLQ13371 301 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PKDCCQ504Y2 493 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PM20D1Q6GTS8 502 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 RHBDF2Q6PJF5 856 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 Q6ZS52 159 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PHLDB2Q86SQ0 1253 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 TMEM25Q86YD3 366 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 C1orf210Q8IVY1 113 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 FAM71AQ8IYT1 594 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 ADGRG2Q8IZP9 1017 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 ADAM32Q8TC27 787 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 IPO4Q8TEX9 1081 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 PPP1R13BQ96KQ4 1090 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 HSFY1Q96LI6 401 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 PRRX2Q99811 253 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 BPIFA3Q9BQP9 254 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 BBS2Q9BXC9 721 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 OLA1Q9NTK5 396 aaKnown RBP10.59□□□□□ -0.71
HERC1-212ENST00000561348 PLK2Q9NYY3 685 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 TJP2Q9UDY2 1190 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 CYTH4Q9UIA0 394 aa10.59□□□□□ -0.71
HERC1-212ENST00000561348 SHISA7A6NL88 538 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 F8VZ95 297 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 STC2O76061 302 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 FBXO21O94952 628 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 MOCS2O96007 188 aaPredicted RBP10.58□□□□□ -0.72
HERC1-212ENST00000561348 MMEP08473 750 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 CHRNB1P11230 501 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 ZNF18P17022 549 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 SOX5P35711 763 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 STAT1P42224 750 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
HERC1-212ENST00000561348 GAD2Q05329 585 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 TCF15Q12870 199 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 C2orf27AQ580R0 203 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 HEATR6Q6AI08 1181 aaKnown RBP10.58□□□□□ -0.72
HERC1-212ENST00000561348 FSTL4Q6MZW2 842 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 C1orf228Q6PIY5 440 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 NOP9Q86U38 636 aaKnown RBP10.58□□□□□ -0.72
HERC1-212ENST00000561348 TMEM35BQ8NCS4 154 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 RNF214Q8ND24 703 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 RNF34Q969K3 372 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 ERLEC1Q96DZ1 483 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 OSBPL6Q9BZF3 934 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 GANQ9H2C0 597 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 HSD3B7Q9H2F3 369 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 ZDHHC4Q9NPG8 344 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 NAALADL1Q9UQQ1 740 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
HERC1-212ENST00000561348 TBC1D3BA6NDS4 549 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 PAPSS1O43252 624 aaPredicted RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 RNF40O75150 1001 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 APODP05090 189 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms