RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 DHCR24Q15392 516 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 SMYD5Q6GMV2 418 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 FSTL4Q6MZW2 842 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 RSRC2Q7L4I2 434 aaKnown RBP12.66□□□□□ -0.38
USP8-212ENST00000560730 TMEM110Q86TL2 294 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
USP8-212ENST00000560730 STK32AQ8WU08 396 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 DDX1Q92499 740 aaKnown RBP12.66□□□□□ -0.38
USP8-212ENST00000560730 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 CPXM1Q96SM3 734 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
USP8-212ENST00000560730 MARCH2Q9P0N8 246 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 TBC1D14Q9P2M4 693 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 SFMBT1Q9UHJ3 866 aa12.66□□□□□ -0.38
USP8-212ENST00000560730 SLC12A8A0AV02 714 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 H0Y858 1186 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 GFPT2O94808 682 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 FBXO21O94952 628 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 LTFP02788 710 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 FYNP06241 537 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 CYP11B1P15538 503 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 KRT9P35527 623 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 OPRD1P41143 372 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 ACADSBP45954 432 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 RPS9P46781 194 aaKnown RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 BPIFB4P59827 614 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 MESP2Q0VG99 397 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 NR1H3Q13133 447 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 PDCLQ13371 301 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 GAS6Q14393 721 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 LY6G5CQ5SRR4 150 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 Q6ZNB5 142 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 TADA2BQ86TJ2 420 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 TMEM25Q86YD3 366 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 FMNL3Q8IVF7 1028 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 SLC20A1Q8WUM9 679 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 IRGQQ8WZA9 623 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 PIWIL1Q96J94 861 aaKnown RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 PCMTD1Q96MG8 357 aaPredicted RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
USP8-212ENST00000560730 KCNH6Q9H252 994 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 LHX5Q9H2C1 402 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 ABCC13Q9NSE7 274 aa12.65□□□□□ -0.38
USP8-212ENST00000560730 KIAA1549LQ6ZVL6 1849 aa12.65□□□□□ -0.39
USP8-212ENST00000560730 ANTXRLA6NF34 631 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 NCAM2O15394 837 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 MSI1O43347 362 aaKnown RBP12.64□□□□□ -0.39
USP8-212ENST00000560730 SOX5P35711 763 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 SLC6A11P48066 632 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 NUBP1P53384 320 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 COG7P83436 770 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 MTAPQ13126 283 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 CCINQ13939 588 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 ANGPT1Q15389 498 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 TAF5Q15542 800 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 Q6ZS52 159 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 C12orf40Q86WS4 652 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 MAML2Q8IZL2 1156 aaPredicted RBP12.64□□□□□ -0.39
USP8-212ENST00000560730 RNF139Q8WU17 664 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 EZH1Q92800 747 aaPredicted RBP12.64□□□□□ -0.39
USP8-212ENST00000560730 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 P2RY13Q9BPV8 354 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 SPHK2Q9NRA0 654 aa12.64□□□□□ -0.39
USP8-212ENST00000560730 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
USP8-212ENST00000560730 NOCTQ9UK39 431 aaKnown RBP12.64□□□□□ -0.39
USP8-212ENST00000560730 A0A1B0GTH6 734 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 EGFP01133 1207 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 ERBB2P04626 1255 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 MMEP08473 750 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 ADH5P11766 374 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 CHRNB2P17787 502 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 CORO1AP31146 461 aaKnown RBP12.63□□□□□ -0.39
USP8-212ENST00000560730 GOLGA8FQ08AF8 430 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 GOLGA8DPQ0D2H9 430 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 PTPN20Q4JDL3 420 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 C1orf228Q6PIY5 440 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 C1orf210Q8IVY1 113 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 EPS8L1Q8TE68 723 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 CD101Q93033 1021 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 FAM149B1Q96BN6 582 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 PRRX2Q99811 253 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 SPATA6Q9NWH7 488 aaPredicted RBP12.63□□□□□ -0.39
USP8-212ENST00000560730 C2orf42Q9NWW7 574 aa12.63□□□□□ -0.39
USP8-212ENST00000560730 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
USP8-212ENST00000560730 STRIP2Q9ULQ0 834 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms