RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 SNRNP25Q9BV90 132 aaKnown RBP12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 RHOBTB2Q9BYZ6 727 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 DCLK3Q9C098 648 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 EPC1Q9H2F5 836 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 GDF3Q9NR23 364 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
AC087878.1-201ENST00000560709 PATJQ8NI35 1801 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 APOC4-APOC2K7ER74 178 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 RAD51CO43502 376 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 APOC2P02655 101 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 CTSAP10619 480 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ATF2P15336 505 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 TCF4P15884 667 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ATP2A2P16615 1042 aaKnown RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 TGM2P21980 687 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 YWHAQP27348 245 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 HTR7P34969 479 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ARL4AP40617 200 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 EPHB4P54760 987 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ARPP19P56211 112 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 GUCY2DQ02846 1103 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 UBE3AQ05086 875 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 PLD1Q13393 1074 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 RAB33AQ14088 237 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 BRMS1LQ5PSV4 323 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 AADACL2Q6P093 401 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 PRSS55Q6UWB4 352 aaPredicted RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 CYP4V2Q6ZWL3 525 aaPredicted RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ATAD1Q8NBU5 361 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 SLC7A14Q8TBB6 771 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 SERPINB11Q96P15 392 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 PGLYRP2Q96PD5 576 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 TTLL2Q9BWV7 592 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 TLR8Q9NR97 1041 aaKnown RBP12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 FZD10Q9ULW2 581 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 AP4E1Q9UPM8 1137 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 VWA8A3KMH1 1905 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 PCNTO95613 3336 aa12.32□□□□□ -0.44
AC087878.1-201ENST00000560709 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 PI4K2BG5E9Z4 385 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 H3BRJ5 948 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 TLL1O43897 1013 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 FGF18O76093 207 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 ABLIM3O94929 683 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 C1RP00736 705 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 FYNP06241 537 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 CSH1P0DML2 217 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 CSH2P0DML3 217 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 SLC2A3P11169 496 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 ELF1P32519 619 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 OR1D2P34982 312 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 PPP3CCP48454 512 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 DPYSL3Q14195 570 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 KCNT1Q5JUK3 1230 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 TXNRD3NBQ6F5E7 133 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 MSANTD2Q6P1R3 559 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 HFE2Q6ZVN8 426 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 BZW1Q7L1Q6 419 aaKnown RBP12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 RTL10Q7L3V2 364 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 TAS1R1Q7RTX1 841 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 ZNF276Q8N554 614 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 BBOF1Q8ND07 529 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 SEC14L1Q92503 715 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 NKD2Q969F2 451 aaPredicted RBP12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 FBXO32Q969P5 355 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 B3GALT6Q96L58 329 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 SAMD11Q96NU1 681 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 CLSTN3Q9BQT9 956 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 CALN1Q9BXU9 219 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 ZBP1Q9H171 429 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 RXFP1Q9HBX9 757 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 PCDH18Q9HCL0 1135 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 DDIT4Q9NX09 232 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 AMACRQ9UHK6 382 aa12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
AC087878.1-201ENST00000560709 DRG1Q9Y295 367 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms