RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 TMEM139Q8IV31 216 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 YAF2Q8IY57 180 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 SLC22A12Q96S37 553 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 CHP1Q99653 195 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 RPP25Q9BUL9 199 aaKnown RBP11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 KLF16Q9BXK1 252 aaPredicted RBP11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 IRX2Q9BZI1 471 aaPredicted RBP11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 DCLK3Q9C098 648 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 CCSER2Q9H7U1 834 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 POPDC2Q9HBU9 364 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 RRN3Q9NYV6 651 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 MUTYHQ9UIF7 546 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 STRIP2Q9ULQ0 834 aa11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 HBS1LQ9Y450 684 aaKnown RBP11.67□□□□□ -0.54
SNRPCP18-201ENST00000560619 LEFTY2O00292 366 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 ARNTLO00327 626 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 ZNF263O14978 683 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 AKR1B10O60218 316 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 HSF2BPO75031 334 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CALB1P05937 261 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 MBL2P11226 248 aaPredicted RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 TNFAIP3P21580 790 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 EIF4A3P38919 411 aaKnown RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 VIPR2P41587 438 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 PGFP49763 221 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 SLC6A3Q01959 620 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 PRKCQQ04759 706 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 RING1Q06587 406 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 MTF1Q14872 753 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CLEC16AQ2KHT3 1053 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 C10orf120Q5SQS8 335 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 BMP8AQ7Z5Y6 402 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 SH3RF2Q8TEC5 729 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 RNF139Q8WU17 664 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 SLC20A1Q8WUM9 679 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 OSCP1Q8WVF1 389 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 RSAD2Q8WXG1 361 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 AZIN2Q96A70 460 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 SHDQ96IW2 340 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 KXD1Q9BQD3 176 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 NACA2Q9H009 215 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 NHEJ1Q9H9Q4 299 aaPredicted RBP11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 ARHGAP20Q9P2F6 1191 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CPQQ9Y646 472 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
SNRPCP18-201ENST00000560619 SSU72P8A0A1W2PR75 194 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 LATS1O95835 1130 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 PLEKP08567 350 aaPredicted RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 GDI1P31150 447 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 NSFP46459 744 aaKnown RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 GPC5P78333 572 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 ZXDBP98169 803 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 AMPD2Q01433 879 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 SPA17Q15506 151 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 HGSNATQ68CP4 663 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 ACAD10Q6JQN1 1059 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 OLFML1Q6UWY5 402 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 RAD9BQ6WBX8 426 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 RSRC2Q7L4I2 434 aaKnown RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 PASD1Q8IV76 773 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 SLC30A5Q8TAD4 765 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 RSPRY1Q96DX4 576 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 LRRC3BQ96PB8 259 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 SLC2A13Q96QE2 648 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 PCDHB18PQ96TA0 734 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 SYNCQ9H7C4 482 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 C8orf33Q9H7E9 229 aaPredicted RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 BRD9Q9H8M2 597 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 SEPT11Q9NVA2 429 aaKnown RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 MARCH2Q9P0N8 246 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 CCL26Q9Y258 94 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
SNRPCP18-201ENST00000560619 ERBB2P04626 1255 aa11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 FYNP06241 537 aa11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 NCAM1P13591 858 aa11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 NOS2P35228 1153 aa11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 NR1H3Q13133 447 aa11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 EIF4EBP2Q13542 120 aaPredicted RBP11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 TRIP4Q15650 581 aaPredicted RBP11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 ACBD5Q5T8D3 534 aaPredicted RBP11.64□□□□□ -0.55
SNRPCP18-201ENST00000560619 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms