RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 LIN52Q52LA3 116 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 FAM102BQ5T8I3 360 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 IER5Q5VY09 327 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PLA2G4FQ68DD2 849 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 MARK2Q7KZI7 788 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 ARCQ7LC44 396 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 SCUBE1Q8IWY4 988 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 PALM2Q8IXS6 379 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 B4GALNT2Q8NHY0 566 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 TRPC4APQ8TEL6 797 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 DDI1Q8WTU0 396 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 SREK1Q8WXA9 508 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 SKA1Q96BD8 255 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 APOPT1Q96IL0 206 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 HAPLN3Q96S86 360 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 SYT15Q9BQS2 421 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 SPATA16Q9BXB7 569 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 NPHS2Q9NP85 383 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 KMT5AQ9NQR1 393 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 HEY2Q9UBP5 337 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 NKX1-2Q9UD57 310 aaPredicted RBP8.89□□□□□ -0.99
CCDC33-209ENST00000560565 STRIP2Q9ULQ0 834 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 MUC6Q6W4X9 2439 aa8.89□□□□□ -0.99
CCDC33-209ENST00000560565 MYH10P35580 1976 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 IGKV6-21A0A0C4DH24 114 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CFAP69A5D8W1 941 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 SIGLEC16A6NMB1 481 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ANKRD63C9JTQ0 380 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 H0Y3Z8 333 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 BIRC5O15392 142 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CYP26A1O43174 497 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ENTPD5O75356 428 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 AP1G2O75843 785 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 LGALS2P05162 132 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 LYNP07948 512 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 INHBAP08476 426 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 KRT7P08729 469 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PABPC4LP0CB38 370 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 RALAP11233 206 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 UNGP13051 313 aaPredicted RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CHRNB2P17787 502 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 RRM1P23921 792 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GSTT1P30711 240 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 POLR2BP30876 1174 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CYP2C18P33260 490 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ARL2P36404 184 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 NPTX2P47972 431 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GCLMP48507 274 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 MARCKSL1P49006 195 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 SERPINB9P50453 376 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ARSEP51690 589 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 EFNA5P52803 228 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PEX3P56589 373 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ACTR3P61158 418 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 YWHAEP62258 255 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PLCB3Q01970 1234 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 POU5F1BQ06416 359 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 SNX1Q13596 522 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 HNRNPDQ14103 355 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 MPP2Q14168 576 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 HIC1Q14526 733 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 MXD4Q14582 209 aaPredicted RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 SHHQ15465 462 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 SNRNP35Q16560 246 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 HADHQ16836 314 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 LRIT3Q3SXY7 679 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 KHDC1Q4VXA5 237 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 STXBP5Q5T5C0 1151 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 HAUS6Q7Z4H7 955 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PHF13Q86YI8 300 aaPredicted RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CRLF3Q8IUI8 442 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 WDR75Q8IWA0 830 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 THNSL1Q8IYQ7 743 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ZBED8Q8IZ13 594 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 LRRC43Q8N309 656 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 TMEM199Q8N511 208 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 C7orf31Q8N865 590 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PPP1R13LQ8WUF5 828 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 LRRC39Q96DD0 335 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 OXNAD1Q96HP4 312 aaPredicted RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 GUCD1Q96NT3 240 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 FNBP1Q96RU3 617 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ECSITQ9BQ95 431 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 DHRS4Q9BTZ2 278 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 KATNAL1Q9BW62 490 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CADM1Q9BY67 442 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 TMEM117Q9H0C3 514 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 HIPK3Q9H422 1215 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 XPNPEP1Q9NQW7 623 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 CHST7Q9NS84 486 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 TRMT13Q9NUP7 481 aaKnown RBP8.88□□□□□ -0.99
CCDC33-209ENST00000560565 PTTG2Q9NZH5 202 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ARHGAP28Q9P2N2 729 aa8.88□□□□□ -0.99
CCDC33-209ENST00000560565 ZNF180Q9UJW8 692 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms