RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TNMDQ9H2S6 317 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CD209Q9NNX6 404 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 DDX19AQ9NUU7 478 aaKnown RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 CFAP45Q9UL16 551 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 KCNJ14Q9UNX9 436 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 SORCS3Q9UPU3 1222 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 FAM50BQ9Y247 325 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 PCDHB1Q9Y5F3 818 aa4.88□□□□□ -1.63
TMOD3-207ENST00000560549 MORC2Q9Y6X9 1032 aaPredicted RBP4.88□□□□□ -1.63
TMOD3-207ENST00000560549 TIAM2Q8IVF5 1701 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 DOCK2Q92608 1830 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 NRXN2Q9P2S2 1712 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 A0A1B0GUL6 1792 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 A0A1B0GVL5 298 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 GOLGA6L4A6NEF3 574 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 GOLGA6L6A8MZA4 724 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 BTBD18B2RXH4 712 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 OVOL3O00110 214 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ORC4O43929 436 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 RNASEH2AO75792 299 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ADCY5O95622 1261 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ALDH2P05091 517 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 SETSIPP0DME0 302 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 IL1R1P14778 569 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 VEGFAP15692 232 aaPredicted RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 VCAM1P19320 739 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 MAKP20794 623 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 U2AF2P26368 475 aaKnown RBP eCLIP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 MARCKSP29966 332 aaPredicted RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 NDUFA8P51970 172 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ANO6Q4KMQ2 910 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 SBK1Q52WX2 424 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 EARS2Q5JPH6 523 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 DACT2Q5SW24 774 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 HYIQ5T013 277 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ATL3Q6DD88 541 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 XRRA1Q6P2D8 792 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 C1orf228Q6PIY5 440 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 C11orf57Q6ZUT1 292 aaPredicted RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 MRGPREQ86SM8 312 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 LUZP1Q86V48 1076 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 FAM186BQ8IYM0 893 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ULK2Q8IYT8 1036 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 RNF169Q8NCN4 708 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 SNRNP27Q8WVK2 155 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ESR2Q92731 530 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 MPP4Q96JB8 637 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 SCLT1Q96NL6 688 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 CRAMP1Q96RY5 1269 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 DMRTA2Q96SC8 542 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 LRFN3Q9BTN0 628 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 MXD3Q9BW11 206 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 CRNKL1Q9BZJ0 848 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 EPC1Q9H2F5 836 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 IKZF4Q9H2S9 585 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 RNF41Q9H4P4 317 aaPredicted RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 IL17RBQ9NRM6 502 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 C1orf112Q9NSG2 853 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 RBM12Q9NTZ6 932 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 SAP30BPQ9UHR5 308 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 DMTF1Q9Y222 760 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 REXO2Q9Y3B8 237 aaKnown RBP4.87□□□□□ -1.63
TMOD3-207ENST00000560549 KIF3AQ9Y496 699 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 DGKBQ9Y6T7 804 aa4.87□□□□□ -1.63
TMOD3-207ENST00000560549 C10orf71Q711Q0 1435 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SPTLC2O15270 562 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 BBOX1O75936 387 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CDKL5O76039 1030 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 YEATS4O95619 227 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC192P0DO97 292 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ADSLP30566 484 aaPredicted RBP4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ME1P48163 572 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 PLCD1P51178 756 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 RENBPP51606 427 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 INHBCP55103 352 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 GEMIN4P57678 1058 aaKnown RBP4.86□□□□□ -1.63
TMOD3-207ENST00000560549 TROAPQ12815 778 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SLC39A14Q15043 492 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 IQCB1Q15051 598 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 STK38Q15208 465 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 NPY5RQ15761 445 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 C12orf60Q5U649 245 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 METRNLQ641Q3 311 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ADALQ6DHV7 355 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SHC4Q6S5L8 630 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF804AQ7Z570 1209 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SRLQ86TD4 932 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 FAM83AQ86UY5 434 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 DZIP1Q86YF9 867 aaKnown RBP4.86□□□□□ -1.63
TMOD3-207ENST00000560549 GRAMD1CQ8IYS0 662 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CERS5Q8N5B7 392 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SRBD1Q8N5C6 995 aaKnown RBP4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SLC44A5Q8NCS7 719 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 GPR156Q8NFN8 814 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CPT1CQ8TCG5 803 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 PARD3BQ8TEW8 1205 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF480Q8WV37 535 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms