RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ABCG1P45844 678 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 ZNF132P52740 706 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 FUT11Q495W5 492 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 CCDC157Q569K6 752 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 UCMAQ8WVF2 138 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 BHMTQ93088 406 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 WBP2Q969T9 261 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 SMARCD1Q96GM5 515 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 DCBLD2Q96PD2 775 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 FBXO44Q9H4M3 255 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 ITM2CQ9NQX7 267 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 TLR8Q9NR97 1041 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 USP36Q9P275 1121 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 NXF1Q9UBU9 619 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-208ENST00000560514 FLNBO75369 2602 aaKnown RBP18.83■□□□□ 0.61
TSPAN3-208ENST00000560514 NPC1O15118 1278 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 CST3P01034 146 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 E2F5Q15329 346 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 USP49Q70CQ1 688 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 BRAPQ7Z569 592 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 FAM35AQ86V20 835 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 CCDC65Q8IXS2 484 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 BAHD1Q8TBE0 780 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 SNX19Q92543 992 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 PRCCQ92733 491 aaPredicted RBP18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 SIPA1Q96FS4 1042 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 TMX3Q96JJ7 454 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 TNIP3Q96KP6 325 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 NUP58Q9BVL2 599 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 TOR4AQ9NXH8 423 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 HSPBP1Q9NZL4 362 aa18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 EIF2B4Q9UI10 523 aaKnown RBP18.83■□□□□ 0.6
TSPAN3-208ENST00000560514 METTL12A8MUP2 240 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 ZDHHC11BP0C7U3 371 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 ATP5C1P36542 298 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 TPMTP51580 245 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 CCDC73Q6ZRK6 1079 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 MARCH9Q86YJ5 346 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 TMPRSS6Q8IU80 811 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 RDH13Q8NBN7 331 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 SYAP1Q96A49 352 aaPredicted RBP18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 CCDC127Q96BQ5 260 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSPAN3-208ENST00000560514 FAM149AA5PLN7 773 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 TNFSF14O43557 240 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 PHACTR2O75167 634 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 AP1G2O75843 785 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 STAT6P42226 847 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 AFF3P51826 1226 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 TEAD4Q15561 434 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 SNRNP35Q16560 246 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 LARP1BQ659C4 914 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 DBX2Q6ZNG2 339 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 SLC39A7Q92504 469 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 CRELD1Q96HD1 420 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 CGRRF1Q99675 332 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 KLF16Q9BXK1 252 aaPredicted RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 MKRN2Q9H000 416 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 KRT82Q9NSB4 513 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 PLK2Q9NYY3 685 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 IL37Q9NZH6 218 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 CABIN1Q9Y6J0 2220 aa18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 HELZ2Q9BYK8 2649 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-208ENST00000560514 A0A1B0GVT2 93 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 KCNJ18B7U540 433 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 E9PAM4 449 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 TK2O00142 265 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 DKK1O94907 266 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 CISD3P0C7P0 127 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 HLA-EP13747 358 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 ATICP31939 592 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 CDH8P55286 799 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 INAVAQ3KP66 663 aa18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.8■□□□□ 0.6
TSPAN3-208ENST00000560514 BPTFQ12830 3046 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 FAM92AA1XBS5 289 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 TBX18O95935 607 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 PRB1P04280 392 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 GRK6P43250 576 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 CSNK1EP49674 416 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 MYL6P60660 151 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 LRRC69Q6ZNQ3 347 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 CACUL1Q86Y37 369 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 THAP10Q9P2Z0 257 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 BTBD3Q9Y2F9 522 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 KNL1Q8NG31 2342 aa18.79■□□□□ 0.6
TSPAN3-208ENST00000560514 STAU1O95793 577 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 TRIM21P19474 475 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 IL12RB1P42701 662 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 PLA2G4AP47712 749 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 BNC1Q01954 994 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 ARID5AQ03989 594 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 CAMK2BQ13554 666 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 PSMD6Q15008 389 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms