RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TMEM92Q6UXU6 159 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 LPCAT2Q7L5N7 544 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 BBS7Q8IWZ6 715 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 TERB1Q8NA31 727 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 TCEAL3Q969E4 200 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 CYP3A43Q9HB55 503 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 CYLDQ9NQC7 956 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 BCCIPQ9P287 314 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMAD3-214ENST00000560402 DEC1Q9P2X7 70 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 HMGXB4Q9UGU5 601 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 CHORDC1Q9UHD1 332 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-214ENST00000560402 EVLQ9UI08 416 aaPredicted RBP14.31□□□□□ -0.12
SMAD3-214ENST00000560402 ZKSCAN5Q9Y2L8 839 aa14.31□□□□□ -0.12
SMAD3-214ENST00000560402 TULP3O75386 442 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 RHOBTB3O94955 611 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 KCNK5O95279 499 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 HLA-DRAP01903 254 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 KRT13P13646 458 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 BCKDHBP21953 392 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 NR2F2P24468 414 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 HOXD12P35452 270 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 MAP3K7CLP57077 242 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 MESP2Q0VG99 397 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 ST3GAL2Q16842 350 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 ISM2Q6H9L7 571 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 KLHDC10Q6PID8 442 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 HTR3DQ70Z44 454 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 TTC30AQ86WT1 665 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 ZNF513Q8N8E2 541 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-214ENST00000560402 CCDC150Q8NCX0 1101 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 ENOX1Q8TC92 643 aaKnown RBP14.3□□□□□ -0.12
SMAD3-214ENST00000560402 FAXDC2Q96IV6 333 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 HNRNPABQ99729 332 aaKnown RBP14.3□□□□□ -0.12
SMAD3-214ENST00000560402 NT5C1AQ9BXI3 368 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 NIF3L1Q9GZT8 377 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 TMEM9BQ9NQ34 198 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.3□□□□□ -0.121e-8■■■■■ 286
SMAD3-214ENST00000560402 FAM49BQ9NUQ9 324 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 MARK1Q9P0L2 795 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 SCML2Q9UQR0 700 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 STARD13Q9Y3M8 1113 aa14.3□□□□□ -0.12
SMAD3-214ENST00000560402 PI4KAP42356 2102 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 TCRBV21S2A2A0A5A6 115 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 CACNG3O60359 315 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 IRF1P10914 325 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 RPL13P26373 211 aaKnown RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 ADORA2BP29275 332 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 ATP5C1P36542 298 aaKnown RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 DHPSP49366 369 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 PSEN1P49768 467 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 GSDMDP57764 484 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 LMAN2Q12907 356 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 TPD52L1Q16890 204 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 ANO4Q32M45 955 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 C10orf76Q5T2E6 689 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 N4BP2L1Q5TBK1 243 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 GRAMD4Q6IC98 578 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 CLEC20AQ6ZU45 233 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 TADA2BQ86TJ2 420 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 SFTPA1Q8IWL2 248 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 TTC39CQ8N584 583 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 ANKRD20A12PQ8NF67 263 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 XPO6Q96QU8 1125 aaKnown RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 CDK5RAP1Q96SZ6 601 aaKnown RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 FAM124BQ9H5Z6 455 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-214ENST00000560402 INVSQ9Y283 1065 aa14.29□□□□□ -0.12
SMAD3-214ENST00000560402 MAP3K13O43283 966 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 ADAM23O75077 832 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 CILPO75339 1184 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 BEST1O76090 585 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 SERPINC1P01008 464 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 HOXB2P14652 356 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 NOVA1P51513 510 aaKnown RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 ORC1Q13415 861 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 C1orf220Q5T0J3 134 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 SPOPLQ6IQ16 392 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 PSAPL1Q6NUJ1 521 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 SLC36A4Q6YBV0 504 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 ZNF276Q8N554 614 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 C12orf29Q8N999 325 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 KLF16Q9BXK1 252 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 DNAJC17Q9NVM6 304 aaKnown RBP14.28□□□□□ -0.12
SMAD3-214ENST00000560402 WDR35Q9P2L0 1181 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 IMPACTQ9P2X3 320 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
SMAD3-214ENST00000560402 ANTXRLA6NF34 631 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 C4orf47A7E2U8 309 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 HHLA1C9JL84 531 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 NEDD8-MDP1E9PL57 170 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 ZBTB24O43167 697 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 CYP26A1O43174 497 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 AP5Z1O43299 807 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms