RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 WDR35Q9P2L0 1181 aa17.57■□□□□ 0.4
HERC1-207ENST00000560316 CCDC39Q9UFE4 941 aa17.57■□□□□ 0.4
HERC1-207ENST00000560316 EIF2B4Q9UI10 523 aaKnown RBP17.57■□□□□ 0.4
HERC1-207ENST00000560316 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.57■□□□□ 0.4
HERC1-207ENST00000560316 METTL12A8MUP2 240 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 KIAA0391O15091 583 aaKnown RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 FLRT2O43155 660 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 TLR5O60602 858 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 EIF5BO60841 1220 aaKnown RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 C1QL1O75973 258 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 DLATP10515 647 aaKnown RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 TPMTP51580 245 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 STARD3Q14849 445 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 RRAGBQ5VZM2 374 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 PAQR9Q6ZVX9 377 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 METTL3Q86U44 580 aaKnown RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 RDH13Q8NBN7 331 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 PIP4K2CQ8TBX8 421 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 P2RY11Q96G91 374 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 UBL7Q96S82 380 aaPredicted RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 PANK4Q9NVE7 773 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 HSPBP1Q9NZL4 362 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 NXF1Q9UBU9 619 aaKnown RBP17.56■□□□□ 0.4
HERC1-207ENST00000560316 PCDHGB2Q9Y5G2 931 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 SLCO1B1Q9Y6L6 691 aa17.56■□□□□ 0.4
HERC1-207ENST00000560316 FAM92AA1XBS5 289 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 FRMD3A2A2Y4 597 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 KALRNO60229 2985 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 FAM163BP0C2L3 166 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 TNNI1P19237 187 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 ABCG1P45844 678 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 CSNK1EP49674 416 aaKnown RBP17.55■□□□□ 0.4
HERC1-207ENST00000560316 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 SLC39A7Q92504 469 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 DMAP1Q9NPF5 467 aaPredicted RBP17.55■□□□□ 0.4
HERC1-207ENST00000560316 KNL1Q8NG31 2342 aa17.55■□□□□ 0.4
HERC1-207ENST00000560316 ATP8B3O60423 1300 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 SHROOM3Q8TF72 1996 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 IL12RB1P42701 662 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 CDH8P55286 799 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 MYL6P60660 151 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 TMPRSS6Q8IU80 811 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 PDCD7Q8N8D1 485 aaKnown RBP17.54■□□□□ 0.4
HERC1-207ENST00000560316 C1orf216Q8TAB5 229 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 SNX19Q92543 992 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 HPS3Q969F9 1004 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 CCDC127Q96BQ5 260 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 SIPA1Q96FS4 1042 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 SMYD3Q9H7B4 428 aa17.54■□□□□ 0.4
HERC1-207ENST00000560316 LSM7Q9UK45 103 aaKnown RBP17.54■□□□□ 0.4
HERC1-207ENST00000560316 AP1G2O75843 785 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 BEST1O76090 585 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 ITPKBP27987 946 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 SMAD1Q15797 465 aaKnown RBP17.53■□□□□ 0.4
HERC1-207ENST00000560316 KIF19Q2TAC6 998 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 FAM124AQ86V42 546 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 ZMIZ2Q8NF64 920 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 SMARCD1Q96GM5 515 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 CGRRF1Q99675 332 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 SMOQ99835 787 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.41e-22■■■■■ 419.2
HERC1-207ENST00000560316 KRT82Q9NSB4 513 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 OSER1Q9NX31 292 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 THAP10Q9P2Z0 257 aaPredicted RBP17.53■□□□□ 0.4
HERC1-207ENST00000560316 SNX11Q9Y5W9 270 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 CABIN1Q9Y6J0 2220 aa17.53■□□□□ 0.4
HERC1-207ENST00000560316 KCNK3O14649 394 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 MDM4O15151 490 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 TNFSF14O43557 240 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 OXTRP30559 389 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 HOXD13P35453 343 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 ATP5C1P36542 298 aaKnown RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 TRPC3Q13507 836 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 SUZ12Q15022 739 aaKnown RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 SNRNP35Q16560 246 aaKnown RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 PTPRNQ16849 979 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 GEN1Q17RS7 908 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 DHRS13Q6UX07 377 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 ZNF516Q92618 1163 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 ELMO3Q96BJ8 720 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 XYLT2Q9H1B5 865 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 TLR8Q9NR97 1041 aaKnown RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 FBXO2Q9UK22 296 aaPredicted RBP17.52■□□□□ 0.4
HERC1-207ENST00000560316 FBXO10Q9UK96 956 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.4
HERC1-207ENST00000560316 PLK4O00444 970 aa17.51■□□□□ 0.39
HERC1-207ENST00000560316 ACADMP11310 421 aa17.51■□□□□ 0.39
HERC1-207ENST00000560316 CCDC130P13994 396 aa17.51■□□□□ 0.39
HERC1-207ENST00000560316 ACO1P21399 889 aaKnown RBP17.51■□□□□ 0.39
HERC1-207ENST00000560316 COPAP53621 1224 aa17.51■□□□□ 0.39
HERC1-207ENST00000560316 CYP24A1Q07973 514 aa17.51■□□□□ 0.39
HERC1-207ENST00000560316 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms