RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 ADCY4Q8NFM4 1077 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 SLC35C1Q96A29 364 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 AGPAT1Q99943 283 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 SNX25Q9H3E2 840 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 SATB2Q9UPW6 733 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 TCP10L2B9ZVM9 353 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 CLASP2O75122 1294 aaKnown RBP19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 PRELPP51888 382 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 STAT2P52630 851 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 BNIP3Q12983 259 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 TTC23LQ6PF05 361 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 FAM118BQ9BPY3 351 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 GCOM2Q9BZD3 368 aaPredicted RBP19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 MYRFQ9Y2G1 1151 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 CORINQ9Y5Q5 1042 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 ZNF701M0R085 212 aaPredicted RBP19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 KLHL41O60662 606 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 PIAS1O75925 651 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 DHRS4L1P0CG22 281 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 AKR1B1P15121 316 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 NR4A1P22736 598 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 ARHGAP44Q17R89 818 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 TMEM119Q4V9L6 283 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 GSTA5Q7RTV2 222 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 DEFB107AQ8IZN7 70 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 SLC15A4Q8N697 577 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 CEP95Q96GE4 821 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 ROBO3Q96MS0 1386 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 RAB34Q9BZG1 259 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 MOSPD1Q9UJG1 213 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 ZNRF3Q9ULT6 936 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 RNF11Q9Y3C5 154 aa19.8■□□□□ 0.76
SEMA4B-215ENST00000560089 MRPS9P82933 396 aaKnown RBP19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 EFHC2Q5JST6 749 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 SETD3Q86TU7 594 aaPredicted RBP19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 ZBTB46Q86UZ6 589 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 GRAMD2AQ8IUY3 354 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 ELMOD1Q8N336 334 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 FBXW8Q8N3Y1 598 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 CCDC33Q8N5R6 958 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 PNMA1Q8ND90 353 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 SLC20A1Q8WUM9 679 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 CAPSLQ8WWF8 208 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 A0A1W2PPW3 197 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 GOLGA8CPA6NN73 597 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 GMNNO75496 209 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 PRKACBP22694 351 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 ZBED5Q49AG3 693 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 DENND5BQ6ZUT9 1274 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 TICAM1Q8IUC6 712 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 ATP6V0D2Q8N8Y2 350 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 TRUB1Q8WWH5 349 aaKnown RBP19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 BARHL2Q9NY43 387 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 SERPINB13Q9UIV8 391 aa19.79■□□□□ 0.76
SEMA4B-215ENST00000560089 ZNF646O15015 1829 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 H3BNH8 94 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 PSMD11O00231 422 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ALOX15BO15296 676 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 CD247P20963 164 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 FXR2P51116 673 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 CDH15P55291 814 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 TCEAL1Q15170 157 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 CPSF7Q8N684 471 aaKnown RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ZNF564Q8TBZ8 553 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 RMND5BQ96G75 393 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 COPS7BQ9H9Q2 264 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ATP11BQ9Y2G3 1177 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 GTPBP10A4D1E9 387 aaKnown RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 SFI1A8K8P3 1242 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 LRRN2O75325 713 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ETV4P43268 484 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 KRT76Q01546 638 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ECM1Q16610 540 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 ZNF746Q6NUN9 644 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 CHERPQ8IWX8 916 aaKnown RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 CDAN1Q8IWY9 1227 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 TBCKQ8TEA7 893 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 MED30Q96HR3 178 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 PSD2Q9BQI7 771 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 SHCBP1LQ9BZQ2 653 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 INO80BQ9C086 356 aaPredicted RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 GPR88Q9GZN0 384 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 DDX56Q9NY93 547 aaKnown RBP19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 SEL1LQ9UBV2 794 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 B3GNT3Q9Y2A9 372 aa19.78■□□□□ 0.76
SEMA4B-215ENST00000560089 MT-ND3P03897 115 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 C8BP07358 591 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 CSE1LP55060 971 aaKnown RBP19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 TTC30AQ86WT1 665 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 FAR2Q96K12 515 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 PAFAH2Q99487 392 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 HERPUD2Q9BSE4 406 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 HERC2P3Q9BVR0 1158 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 RNF38Q9H0F5 515 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 RPF2Q9H7B2 306 aaKnown RBP19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 MRGBPQ9NV56 204 aa19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 RSL1D1O76021 490 aaKnown RBP19.77■□□□□ 0.76
SEMA4B-215ENST00000560089 BMP10O95393 424 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms