RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 APBB2Q92870 758 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 REPS1Q96D71 796 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAM111AQ96PZ2 611 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 AIFM2Q9BRQ8 373 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 RIBC2Q9H4K1 309 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 RMI1Q9H9A7 625 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 IFRD1O00458 451 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 CDH18Q13634 790 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 OCLNQ16625 522 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 KCTD21Q4G0X4 260 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 MED8Q96G25 268 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 KATNAL1Q9BW62 490 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 GREM2Q9H772 168 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
CSPG4P12-202ENST00000559989 TTC26A0AVF1 554 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 POTEMA6NI47 508 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 PLOD3O60568 738 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 LDLRP01130 860 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 ARID5BQ14865 1188 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 TDRD10Q5VZ19 366 aaKnown RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 EXOC3L1Q86VI1 746 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 GDPD5Q8WTR4 605 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 ISCUQ9H1K1 167 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 VPS4BO75351 444 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 CHRNGP07510 517 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 YY1P25490 414 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 DCAF6Q58WW2 860 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 DCUN1D5Q9BTE7 237 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 CCSER1Q9C0I3 900 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 EURLQ9NYK6 297 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 PTGES3LE9PB15 166 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 RBP1P09455 135 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC2A3P11169 496 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 CCNI2Q6ZMN8 369 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 CXXC5Q7LFL8 322 aaKnown RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 DRG1Q9Y295 367 aaKnown RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 NCAPD2Q15021 1401 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 LOC100506127A0A0U1RQW1 187 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 GTF2H1P32780 548 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 BICRALQ6AI39 1079 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 BAIAP2Q9UQB8 552 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 MLH3Q9UHC1 1453 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 GNB5O14775 395 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 RGS10O43665 173 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 KRT33AO76009 404 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 USP17L8P0C7I0 530 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 FCER1AP12319 257 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 RGS7P49802 495 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 KYQ8NBH2 561 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 SHCBP1LQ9BZQ2 653 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 NFIAQ12857 509 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF177Q13360 481 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 COLGALT2Q8IYK4 626 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 OR7A2PQ8NGA2 310 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 GANQ9H2C0 597 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 ELOVL6Q9H5J4 265 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 MYH10P35580 1976 aa14.22□□□□□ -0.13
CSPG4P12-202ENST00000559989 PIK3C3Q8NEB9 887 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 KLHL32Q96NJ5 620 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 EHD1Q9H4M9 534 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 CIDEBQ9UHD4 219 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 PLA2G6O60733 806 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 RGS1Q08116 209 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 INO80DQ53TQ3 878 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ERICH5Q6P6B1 374 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 DSG4Q86SJ6 1040 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF677Q86XU0 584 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZDHHC13Q8IUH4 622 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 EPB41L1Q9H4G0 881 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 NEUROD4Q9HD90 331 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 G3V2T6 193 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 CLOCKO15516 846 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 CRTAMO95727 393 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ILF2Q12905 390 aaKnown RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 DLG1Q12959 904 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 GRB14Q14449 540 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC29A2Q14542 456 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 POTEGQ6S5H5 508 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 GUF1Q8N442 669 aaKnown RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 AMER2Q8N7J2 671 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 BBS4Q96RK4 519 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 SEPHS2Q99611 448 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 PUS7LQ9H0K6 701 aaKnown RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ATP5F1P24539 256 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 NR1D2Q14995 579 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 BLOC1S5Q8TDH9 187 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADGRE3Q9BY15 652 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 EMC3Q9P0I2 261 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 KIF1BO60333 1816 aa14.21□□□□□ -0.13
CSPG4P12-202ENST00000559989 PSMD11O00231 422 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms