RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CACTINQ8WUQ7 758 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 CD101Q93033 1021 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 PCED1BQ96HM7 432 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 HPDLQ96IR7 371 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 SPATA17Q96L03 361 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 SYT15Q9BQS2 421 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 MRPL45Q9BRJ2 306 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 LSM14BQ9BX40 385 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 DPEP3Q9H4B8 488 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 TRPC7Q9HCX4 862 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 KBTBD4Q9NVX7 518 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 UXTQ9UBK9 157 aaPredicted RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 CCDC39Q9UFE4 941 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 SLC8A2Q9UPR5 921 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 EXOC7Q9UPT5 735 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 INVSQ9Y283 1065 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 PCDHGA5Q9Y5G8 931 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 TPRP12270 2363 aaKnown RBP6.19□□□□□ -1.42
USP3-215ENST00000559771 SDK1Q7Z5N4 2213 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 MYOFQ9NZM1 2061 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 ABCA7Q8IZY2 2146 aa6.19□□□□□ -1.42
USP3-215ENST00000559771 LNP1A1A4G5 178 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 BCLAF3A2AJT9 711 aaKnown RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 ZNF840PA6NDX5 716 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PATE3B3GLJ2 98 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 F8VP50 259 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 LEFTY2O00292 366 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CDX4O14627 284 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 SCAMP3O14828 347 aaKnown RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 GIPC1O14908 333 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 FOXD2O60548 495 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 KCNK5O95279 499 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 APBB3O95704 486 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 STAU1O95793 577 aaKnown RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 OAS1P00973 400 aaKnown RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 CYP17A1P05093 508 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CKMP06732 381 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PDGFRBP09619 1106 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CCDC192P0DO97 292 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 HDCP19113 662 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PCSK1P29120 753 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CASP1P29466 404 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 STAT6P42226 847 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PLA2G4AP47712 749 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 SLC6A11P48066 632 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 IFNAR2P48551 515 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 NASPP49321 788 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 PGFP49763 221 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 NOP14P78316 857 aaKnown RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 SLC7A9P82251 487 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 SHC2P98077 582 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 ALCAMQ13740 583 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 ST3GAL2Q16842 350 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 AASDHQ4L235 1098 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 EMC10Q5UCC4 262 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CC2D1AQ6P1N0 951 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 CNNM4Q6P4Q7 775 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 RHBDF2Q6PJF5 856 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 SHC4Q6S5L8 630 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 VSTM1Q6UX27 236 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 CCDC73Q6ZRK6 1079 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 DENND5BQ6ZUT9 1274 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PAQR9Q6ZVX9 377 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 TRAPPC11Q7Z392 1133 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 WDR49Q8IV35 697 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 PDILTQ8N807 584 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 FRMD1Q8N878 549 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 LINC00301Q8NCQ3 95 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 OLIG1Q8TAK6 271 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 MYCBPAPQ8TBZ2 947 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 ZNF507Q8TCN5 953 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 SCFD1Q8WVM8 642 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 ATP2A3Q93084 1043 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 WBP2Q969T9 261 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 C8orf48Q96LL4 319 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 B3GNT5Q9BYG0 378 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 TRIM9Q9C026 710 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 AGPAT3Q9NRZ7 376 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 HSPBP1Q9NZL4 362 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 MAGEC2Q9UBF1 373 aaPredicted RBP6.18□□□□□ -1.42
USP3-215ENST00000559771 CDH9Q9ULB4 789 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 THADAQ6YHU6 1953 aa6.18□□□□□ -1.42
USP3-215ENST00000559771 ZNF233A6NK53 670 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 SGK1O00141 431 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CLDN5O00501 218 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TNFRSF10BO14763 440 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 KIAA0391O15091 583 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 GREM1O60565 184 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TACC1O75410 805 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TOP3BO95985 862 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 TMEM191BP0C7N4 346 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 PTPN1P18031 435 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 GRIK1P39086 918 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ADH7P40394 386 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 KIR2DL1P43626 348 aaPredicted RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 SEC13P55735 322 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms