RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FAM49BQ9NUQ9 324 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
TPM1-220ENST00000559556 CALCOCO1Q9P1Z2 691 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 SCML2Q9UQR0 700 aa13.83□□□□□ -0.2
TPM1-220ENST00000559556 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 IKBKBO14920 756 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 NR3C1P04150 777 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 FAM200BP0CF97 657 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 TYRP14679 529 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 MAPK8P45983 427 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 RPL6Q02878 288 aaKnown RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 GOLGA8FQ08AF8 430 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 GOLGA8DPQ0D2H9 430 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 DUOXA1Q1HG43 343 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 KLHDC10Q6PID8 442 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 SV2AQ7L0J3 742 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 RABEPKQ7Z6M1 372 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 PIP4P1Q86T03 277 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 KDF1Q8NAX2 398 aaPredicted RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 CEP76Q8TAP6 659 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 GATA6Q92908 595 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 SNX21Q969T3 373 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 XPO6Q96QU8 1125 aaKnown RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 GABRG3Q99928 467 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 CAPN10Q9HC96 672 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 PNPLA8Q9NP80 782 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 OSER1Q9NX31 292 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 SERTAD1Q9UHV2 236 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 PCDHA5Q9Y5H7 936 aa13.82□□□□□ -0.2
TPM1-220ENST00000559556 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
TPM1-220ENST00000559556 URB1O60287 2271 aaKnown RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 IGHV1OR15-9A0A0B4J2B8 117 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 TMEM8BA6NDV4 472 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 MAPK13O15264 365 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 CYP26A1O43174 497 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 TBX18O95935 607 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 HLA-DRAP01903 254 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 CFIP05156 583 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 SERPINF2P08697 491 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 NDUFV2P19404 249 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 PIK3CAP42336 1068 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 KMT5BQ4FZB7 885 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 Q6ZNB5 142 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 IPO4Q8TEX9 1081 aaKnown RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 TWNKQ96RR1 684 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 HNRNPABQ99729 332 aaKnown RBP13.81□□□□□ -0.2
TPM1-220ENST00000559556 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■■■□□ 15.3
TPM1-220ENST00000559556 SLC6A14Q9UN76 642 aa13.81□□□□□ -0.2
TPM1-220ENST00000559556 PRRT4C9JH25 899 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 ZNF217O75362 1048 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 TOP3BO95985 862 aaKnown RBP13.8□□□□□ -0.2
TPM1-220ENST00000559556 MYL1P05976 194 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 SPINK2P20155 84 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 ADORA2BP29275 332 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 WASP42768 502 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 ZNF33AQ06730 810 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 KIAA1211LQ6NV74 962 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 SLC41A1Q8IVJ1 513 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 PAGE5Q96GU1 130 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 ACOX2Q99424 681 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM1-220ENST00000559556 USP25Q9UHP3 1055 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 RCOR1Q9UKL0 485 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 CFAP45Q9UL16 551 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 ZMIZ1Q9ULJ6 1067 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 TRAF3IP3Q9Y228 551 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 FRMD4BQ9Y2L6 1034 aa13.8□□□□□ -0.2
TPM1-220ENST00000559556 A0A1W2PQH9 124 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 GFRA2O00451 464 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 RARGP13631 454 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 ACO1P21399 889 aaKnown RBP13.79□□□□□ -0.2
TPM1-220ENST00000559556 DGKGP49619 791 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 PSEN1P49768 467 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 KIF11P52732 1056 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 GFPT1Q06210 699 aaPredicted RBP13.79□□□□□ -0.2
TPM1-220ENST00000559556 NFIL3Q16649 462 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 CEP135Q66GS9 1140 aa13.79□□□□□ -0.2
TPM1-220ENST00000559556 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms