RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 COCHO43405 550 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 EPHX1P07099 455 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 SCP2P22307 547 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 GUCY2CP25092 1073 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 RBMS1P29558 406 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 CDC25AP30304 524 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 POLR2BP30876 1174 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 CCR10P46092 362 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 ACOT2P49753 483 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 INHBCP55103 352 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 PSMC1P62191 440 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 RACK1P63244 317 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 DAB2P98082 770 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 TFAMQ00059 246 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 GRIN1Q05586 938 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 ORC2Q13416 577 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 ZSCAN23Q3MJ62 389 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 HECTD3Q5T447 861 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 KRT79Q5XKE5 535 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 DIEXFQ68CQ4 756 aaKnown RBP10.27□□□□□ -0.77
SMAD3-211ENST00000559460 HS2ST1Q7LGA3 356 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 NT5DC4Q86YG4 428 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 RFFLQ8WZ73 363 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 BHMTQ93088 406 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 BIRC7Q96CA5 298 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 VCPIP1Q96JH7 1222 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 PKMYT1Q99640 499 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 TRIM9Q9C026 710 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 POLR1BQ9H9Y6 1135 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 GDF3Q9NR23 364 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 AASDHPPTQ9NRN7 309 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 AGAP1Q9UPQ3 857 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 PCDHB1Q9Y5F3 818 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 SNX9Q9Y5X1 595 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 SLCO1B1Q9Y6L6 691 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 F8VP50 259 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 SUV39H1O43463 412 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 FAM189A1O60320 539 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 USP12O75317 370 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 DXOO77932 396 aaKnown RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 RTN3O95197 1032 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 IL18RAPO95256 599 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 DNTTP04053 509 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ITGB3P05106 788 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 KRT19P08727 400 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 YWHAQP27348 245 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ACSL1P33121 698 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ABCD1P33897 745 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 TLE1Q04724 770 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ZRSR1Q15695 479 aaKnown RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ZNF174Q15697 407 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 CCDC142Q17RM4 750 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 TTC31Q49AM3 519 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 SLC45A4Q5BKX6 768 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 PRAMEF14Q5SWL7 426 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 SERPINA13PQ6UXR4 307 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 C1orf186Q6ZWK4 172 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 OXR1Q8N573 874 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 TOP6BLQ8N6T0 577 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 SAP25Q8TEE9 199 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 CACTINQ8WUQ7 758 aaKnown RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 OVCA2Q8WZ82 227 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 KCNB2Q92953 911 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 DUSP9Q99956 384 aaKnown RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 LRRC4CQ9HCJ2 640 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 MYO9AB2RTY4 2548 aa10.26□□□□□ -0.77
SMAD3-211ENST00000559460 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
SMAD3-211ENST00000559460 TMEM131Q92545 1883 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 CDC45O75419 566 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 KRT38O76015 456 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 PIGRP01833 764 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 ACP1P24666 158 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 EPHA8P29322 1005 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-211ENST00000559460 LSSP48449 732 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMAD3-211ENST00000559460 NCKAP1LP55160 1127 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 BMP2KLQ5H9B9 411 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 KCNT1Q5JUK3 1230 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 SLFN12LQ6IEE8 588 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 LRRC52Q8N7C0 313 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 OR2T3Q8NH03 318 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 GANCQ8TET4 914 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 C8orf48Q96LL4 319 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 CIPCQ9C0C6 399 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 STARD5Q9NSY2 213 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 MARK1Q9P0L2 795 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 THAP10Q9P2Z0 257 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-211ENST00000559460 AGO2Q9UKV8 859 aaKnown RBP10.25□□□□□ -0.77
SMAD3-211ENST00000559460 NCKAP1Q9Y2A7 1128 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 ATMQ13315 3056 aa10.25□□□□□ -0.77
SMAD3-211ENST00000559460 DOPEY2Q9Y3R5 2298 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 KNTC1P50748 2209 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 FAM47DPA6NHR8 397 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 TRAK2O60296 914 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 TSPAN3O60637 253 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 ATP2C2O75185 946 aa10.24□□□□□ -0.77
SMAD3-211ENST00000559460 PPFIA2O75334 1257 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms