RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 HOXB3P14651 431 aaPredicted RBP17.71■□□□□ 0.43
PSEN1-224ENST00000559361 FERP16591 822 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 ATF6P18850 670 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 TUFMP49411 452 aaKnown RBP17.71■□□□□ 0.43
PSEN1-224ENST00000559361 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
PSEN1-224ENST00000559361 CFAP221Q4G0U5 840 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 SGO2Q562F6 1265 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 TMC6Q7Z403 805 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 TMEM150AQ86TG1 271 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 ZNF677Q86XU0 584 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 BAP1Q92560 729 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 PKMYT1Q99640 499 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 LPIN3Q9BQK8 851 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 ELOVL4Q9GZR5 314 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 SMG9Q9H0W8 520 aaKnown RBP17.71■□□□□ 0.43
PSEN1-224ENST00000559361 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 EBF1Q9UH73 591 aa17.71■□□□□ 0.43
PSEN1-224ENST00000559361 AJAP1Q9UKB5 411 aaPredicted RBP17.71■□□□□ 0.43
PSEN1-224ENST00000559361 KIAA1549LQ6ZVL6 1849 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 C4orf47A7E2U8 309 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 ACAT1P24752 427 aaKnown RBP17.7■□□□□ 0.42
PSEN1-224ENST00000559361 USP8P40818 1118 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 PDE6CP51160 858 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 ARID5BQ14865 1188 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 TSR1Q2NL82 804 aaKnown RBP17.7■□□□□ 0.42
PSEN1-224ENST00000559361 ZNF394Q53GI3 561 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 SYT13Q7L8C5 426 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 ACOT1Q86TX2 421 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 SPATA2LQ8IUW3 424 aaPredicted RBP17.7■□□□□ 0.42
PSEN1-224ENST00000559361 CEP295NLQ96MC4 621 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
PSEN1-224ENST00000559361 TWNKQ96RR1 684 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 EDEM2Q9BV94 578 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 EBF3Q9H4W6 596 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 AIPL1Q9NZN9 384 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 CCL26Q9Y258 94 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 NME7Q9Y5B8 376 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 PCDHB5Q9Y5E4 795 aa17.7■□□□□ 0.42
PSEN1-224ENST00000559361 BZW2Q9Y6E2 419 aaKnown RBP17.7■□□□□ 0.42
PSEN1-224ENST00000559361 LRRC53A6NM62 1247 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 RHOBTB1O94844 696 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 DRD1P21728 446 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 GNA15P30679 374 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 CASP14P31944 242 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 MAGEA11P43364 429 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 GALK1P51570 392 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 SLC8A3P57103 927 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 PSMC1P62191 440 aaKnown RBP17.69■□□□□ 0.42
PSEN1-224ENST00000559361 TBX2Q13207 712 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-224ENST00000559361 ELF2Q15723 593 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 FBXO43Q4G163 708 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 SLC39A12Q504Y0 691 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 MDH1BQ5I0G3 518 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 SFMBT2Q5VUG0 894 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 TRIM68Q6AZZ1 485 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 VSTM1Q6UX27 236 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 RIN3Q8TB24 985 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 USP13Q92995 863 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-224ENST00000559361 PCED1BQ96HM7 432 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 HHIPQ96QV1 700 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 HNRNPABQ99729 332 aaKnown RBP17.69■□□□□ 0.42
PSEN1-224ENST00000559361 DPEP3Q9H4B8 488 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 CRTAC1Q9NQ79 661 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 GTF3C4Q9UKN8 822 aa17.69■□□□□ 0.42
PSEN1-224ENST00000559361 PTPRDP23468 1912 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 TMEM8BA6NDV4 472 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 SOBPA7XYQ1 873 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 AKR1B15C9JRZ8 316 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-224ENST00000559361 DCLK1O15075 740 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 LAMA5O15230 3695 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CYP26A1O43174 497 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 MFAP3LO75121 409 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 F11P03951 625 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CEACAM1P13688 526 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CD19P15391 556 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CSRP1P21291 193 aaKnown RBP17.68■□□□□ 0.42
PSEN1-224ENST00000559361 HNRNPH3P31942 346 aaKnown RBP17.68■□□□□ 0.42
PSEN1-224ENST00000559361 KRT9P35527 623 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 AMPD2Q01433 879 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 ZNF252P-AS1Q0IIN9 211 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 VEPH1Q14D04 833 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CNGA2Q16280 664 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 DAB2IPQ5VWQ8 1189 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 EZH1Q92800 747 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-224ENST00000559361 GATA6Q92908 595 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 MYLPFQ96A32 169 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 CYFIP2Q96F07 1278 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 SMARCD1Q96GM5 515 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 DNAJC7Q99615 494 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 ZNHIT6Q9NWK9 470 aaKnown RBP17.68■□□□□ 0.42
PSEN1-224ENST00000559361 HESX1Q9UBX0 185 aa17.68■□□□□ 0.42
PSEN1-224ENST00000559361 RNF225M0QZC1 329 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-224ENST00000559361 CDX4O14627 284 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-224ENST00000559361 ATP2C2O75185 946 aa17.67■□□□□ 0.42
PSEN1-224ENST00000559361 GFPT2O94808 682 aa17.67■□□□□ 0.42
PSEN1-224ENST00000559361 ARSAP15289 507 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms