RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 AP3D1O14617 1153 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ZNF185O15231 689 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 NOBOXO60393 691 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PRAMEF10O60809 474 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 RAD17O75943 681 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 WDR47O94967 919 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 TFRCP02786 760 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CSF1RP07333 972 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 SLC3A2P08195 630 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 PDHA1P08559 390 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A15PP0C7V4 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM90A14PP0C7W9 464 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 HSPA1AP0DMV8 641 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 HSPA1BP0DMV9 641 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 ZNF37AP17032 561 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CHMP24386 653 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PRKCHP24723 683 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ABCD3P28288 659 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 KRT20P35900 424 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PBX1P40424 430 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 RAP1GAPP47736 663 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 DRG2P55039 364 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 EIF4A1P60842 406 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 DCAF7P61962 342 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 SETQ01105 290 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CAP1Q01518 475 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 TAP2Q03519 686 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 OCA2Q04671 838 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FOXL1Q12952 345 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 DYRK1AQ13627 763 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CBFBQ13951 182 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 HLXQ14774 488 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 SMAD1Q15797 465 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 GEN1Q17RS7 908 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 LY6KQ17RY6 165 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 TRIM60Q495X7 471 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 LRRC24Q50LG9 513 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PDCD4Q53EL6 469 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 DCAF17Q5H9S7 520 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 METTL24Q5JXM2 366 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM69AQ5T7M9 428 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 TMCO3Q6UWJ1 677 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ATF7IPQ6VMQ6 1270 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CCDC129Q6ZRS4 1044 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 MICALCLQ6ZW33 695 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 B4GALNT4Q76KP1 1039 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 LRRC8DQ7L1W4 858 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 R3HCC1LQ7Z5L2 792 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 ANKS1BQ7Z6G8 1248 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CAND1Q86VP6 1230 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 SIAH1Q8IUQ4 282 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 IZUMO1Q8IYV9 350 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ADGRG5Q8IZF4 528 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FUKQ8N0W3 1084 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ABRAQ8N0Z2 381 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 OR8H2Q8N162 312 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM71DQ8N9W8 422 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 USP38Q8NB14 1042 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ANKRD52Q8NB46 1076 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 B3GALNT2Q8NCR0 500 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 NGDNQ8NEJ9 315 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 LINS1Q8NG48 757 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 NOC3LQ8WTT2 800 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 XAGE5Q8WWM1 108 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ATG4AQ8WYN0 398 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 RFFLQ8WZ73 363 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CENPIQ92674 756 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CUL5Q93034 780 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAM136AQ96C01 138 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 R3HDM4Q96D70 268 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 KIF1BPQ96EK5 621 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 MCRS1Q96EZ8 462 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ZDHHC12Q96GR4 267 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 APOPT1Q96IL0 206 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 FAR2Q96K12 515 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 C7orf26Q96N11 449 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PIGSQ96S52 555 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 HAPLN3Q96S86 360 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 DCLRE1CQ96SD1 692 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 NEU1Q99519 415 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 MNTQ99583 582 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 GPR20Q99678 358 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 MECRQ9BV79 373 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 VN1R3Q9BXE9 311 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ABHD16BQ9H3Z7 469 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 PLEKHA2Q9HB19 425 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 GLOD4Q9HC38 313 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CD320Q9NPF0 282 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 TMLHEQ9NVH6 421 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 HAUS2Q9NVX0 235 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 VSX1Q9NZR4 365 aaPredicted RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CTTNBP2NLQ9P2B4 639 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 VPS51Q9UID3 782 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 CNOT7Q9UIV1 285 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 KCNE5Q9UJ90 142 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 RAB21Q9UL25 225 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ASAP1Q9ULH1 1129 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 RIMKLBQ9ULI2 386 aa2.56□□□□□ -2
GABPB1-209ENST00000559100 ZFR2Q9UPR6 939 aaKnown RBP2.56□□□□□ -2
GABPB1-209ENST00000559100 CAMK2AQ9UQM7 478 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms