RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 HTR3DQ70Z44 454 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-208ENST00000558827 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 FAM160A2Q8N612 972 aaPredicted RBP13.14□□□□□ -0.31
SMAD3-208ENST00000558827 TXNDC5Q8NBS9 432 aaKnown RBP13.14□□□□□ -0.31
SMAD3-208ENST00000558827 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
SMAD3-208ENST00000558827 FAXDC2Q96IV6 333 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 PNPLA8Q9NP80 782 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 DNAJC17Q9NVM6 304 aaKnown RBP13.14□□□□□ -0.31
SMAD3-208ENST00000558827 SFMBT1Q9UHJ3 866 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 RWDD2AQ9UIY3 292 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 GON4LQ3T8J9 2241 aa13.14□□□□□ -0.31
SMAD3-208ENST00000558827 SPAG17Q6Q759 2223 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 SPTBN2O15020 2390 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 EML5Q05BV3 1969 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 E7ENQ6 273 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 SGK1O00141 431 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 XPO1O14980 1071 aaKnown RBP13.13□□□□□ -0.31
SMAD3-208ENST00000558827 RPP40O75818 363 aaKnown RBP13.13□□□□□ -0.31
SMAD3-208ENST00000558827 GNA14O95837 355 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 TYRP14679 529 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
SMAD3-208ENST00000558827 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
SMAD3-208ENST00000558827 ID4P47928 161 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 PMF1Q6P1K2 205 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 SYT13Q7L8C5 426 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 BHLHA9Q7RTU4 235 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 IRF2BP1Q8IU81 584 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 DENND1CQ8IV53 801 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 TSTD1Q8NFU3 115 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 RMDN1Q96DB5 314 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 IPO9Q96P70 1041 aaKnown RBP13.13□□□□□ -0.31
SMAD3-208ENST00000558827 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 MIS12Q9H081 205 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 SMOC1Q9H4F8 434 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 MARCH2Q9P0N8 246 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
SMAD3-208ENST00000558827 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 P4HA2O15460 535 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 MSI1O43347 362 aaKnown RBP13.12□□□□□ -0.31
SMAD3-208ENST00000558827 TSPAN3O60637 253 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 FGFR1OPO95684 399 aaKnown RBP13.12□□□□□ -0.31
SMAD3-208ENST00000558827 APBB3O95704 486 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 GRIA2P42262 883 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 PSEN1P49768 467 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 RSPO4Q2I0M5 234 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-208ENST00000558827 DPCR1Q3MIW9 517 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 BSPRYQ5W0U4 402 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 DENND1BQ6P3S1 775 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 FMNL3Q8IVF7 1028 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 ETFBKMTQ8IXQ9 262 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 PHTF2Q8N3S3 785 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 GAB3Q8WWW8 586 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 RLN3Q8WXF3 142 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 ACDQ96AP0 544 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 ACOX2Q99424 681 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 ARRDC1-AS1Q9H2J1 176 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 HCN2Q9UL51 889 aa13.12□□□□□ -0.31
SMAD3-208ENST00000558827 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMAD3-208ENST00000558827 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.12□□□□□ -0.31
SMAD3-208ENST00000558827 PMM2O15305 246 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 LETM1O95202 739 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 PAEPP09466 180 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 TGM1P22735 817 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 GBP1P32455 592 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 KIR2DL1P43626 348 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 MARSP56192 900 aaKnown RBP13.11□□□□□ -0.31
SMAD3-208ENST00000558827 CNGA2Q16280 664 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 EGFLAMQ63HQ2 1017 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 PM20D1Q6GTS8 502 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 LAIR1Q6GTX8 287 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 Q6ZNB5 142 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 MLKLQ8NB16 471 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
SMAD3-208ENST00000558827 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms