RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TDP1Q9NUW8 608 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 DPP3Q9NY33 737 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 FAM8A1Q9UBU6 413 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 ZMYM5Q9UJ78 669 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 C2CD2Q9Y426 696 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 ZNF462Q96JM2 2506 aa10.38□□□□□ -0.75
SPG11-212ENST00000558790 TEX15Q9BXT5 2789 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 DCLK1O15075 740 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 FBXO24O75426 580 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 PLCG1P19174 1290 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 DRD1P21728 446 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 SCP2P22307 547 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 GSTT1P30711 240 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 GJA4P35212 333 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 SMARCB1Q12824 385 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 MTF1Q14872 753 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 ZNF77Q15935 545 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 CCDC142Q17RM4 750 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 ZC2HC1CQ53FD0 456 aaPredicted RBP10.37□□□□□ -0.75
SPG11-212ENST00000558790 ARL6IP4Q66PJ3 421 aaKnown RBP10.37□□□□□ -0.75
SPG11-212ENST00000558790 RNF43Q68DV7 783 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 ADALQ6DHV7 355 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 PDZD3Q86UT5 571 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 THEM5Q8N1Q8 247 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 CAMKK1Q8N5S9 505 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 MRRFQ96E11 262 aaKnown RBP10.37□□□□□ -0.75
SPG11-212ENST00000558790 P2RY13Q9BPV8 354 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 SCNM1Q9BWG6 230 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 ZHX3Q9H4I2 956 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 ASB7Q9H672 318 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 MAGED2Q9UNF1 606 aaPredicted RBP10.37□□□□□ -0.75
SPG11-212ENST00000558790 PCDHB5Q9Y5E4 795 aa10.37□□□□□ -0.75
SPG11-212ENST00000558790 PCDH15Q96QU1 1955 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 LNP1A1A4G5 178 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 TMEM8BA6NDV4 472 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 KPNA7A9QM74 516 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 TBCAO75347 108 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 APBB3O95704 486 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 KRT18P05783 430 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 GALK1P51570 392 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 GTF2BQ00403 316 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 TSPY1Q01534 308 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 CREB5Q02930 508 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 PCDH1Q08174 1060 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 DMC1Q14565 340 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 ZNF268Q14587 947 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 KARSQ15046 597 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 PDGFRLQ15198 375 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 ELF2Q15723 593 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 SV2CQ496J9 727 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 CC2D1AQ6P1N0 951 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 CRELD2Q6UXH1 353 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 SYT13Q7L8C5 426 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 MON1AQ86VX9 555 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 DCP1BQ8IZD4 617 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 PDCL2Q8N4E4 241 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 CPA6Q8N4T0 437 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 MRPS31Q92665 395 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 RAD54LQ92698 747 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 FAM84AQ96KN4 292 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 AK8Q96MA6 479 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 ZNF560Q96MR9 790 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 SLC22A12Q96S37 553 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 CLEC4MQ9H2X3 399 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 ECT2Q9H8V3 914 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 TRPC7Q9HCX4 862 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 KIAA1522Q9P206 1035 aaPredicted RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 AGO2Q9UKV8 859 aaKnown RBP10.36□□□□□ -0.75
SPG11-212ENST00000558790 WNT6Q9Y6F9 365 aa10.36□□□□□ -0.75
SPG11-212ENST00000558790 BCLAF3A2AJT9 711 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 H3BRJ5 948 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 SLC26A4O43511 780 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 EIF5BO60841 1220 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 NOL4O94818 638 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CKMP06732 381 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CSH1P0DML2 217 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CSH2P0DML3 217 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 ACAT1P24752 427 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 CYP2F1P24903 491 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 POLR2BP30876 1174 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 NOVA1P51513 510 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 AMPD2Q01433 879 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 GRIN1Q05586 938 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 FAM160A1Q05DH4 1040 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 DDR2Q16832 855 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 ZNF423Q2M1K9 1284 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 FBXO43Q4G163 708 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 MEI1Q5TIA1 1274 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CACTIN-AS1Q8N1I8 211 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 BEND7Q8N7W2 519 aaPredicted RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CD101Q93033 1021 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 ATP2A3Q93084 1043 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 CALML4Q96GE6 196 aa10.35□□□□□ -0.75
SPG11-212ENST00000558790 TRMT2BQ96GJ1 504 aaKnown RBP10.35□□□□□ -0.75
SPG11-212ENST00000558790 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms