RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 TLE6Q9H808 572 aa24.92■■□□□ 1.58
MEIS3-204ENST00000558555 CLIC5Q9NZA1 410 aa24.92■■□□□ 1.58
MEIS3-204ENST00000558555 TRANK1O15050 2925 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 EPOPA6NHQ4 379 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 M0QYT0 321 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 PRPSAP2O60256 369 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 KRT7P08729 469 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 HMGA1P17096 107 aaKnown RBP24.91■■□□□ 1.58
MEIS3-204ENST00000558555 MIPP30301 263 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 RWDD2BP57060 319 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 ZFYVE27Q5T4F4 411 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 SCYL2Q6P3W7 929 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 ARFGAP1Q8N6T3 406 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 HDAC7Q8WUI4 952 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 PPP2R3CQ969Q6 453 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 PBKQ96KB5 322 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 FAM204AQ9H8W3 233 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 MAN1C1Q9NR34 630 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 USP18Q9UMW8 372 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 COL4A4P53420 1690 aaPredicted RBP24.91■■□□□ 1.58
MEIS3-204ENST00000558555 REV3LO60673 3130 aa24.91■■□□□ 1.58
MEIS3-204ENST00000558555 ATG2AQ2TAZ0 1938 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 TFE3P19532 575 aaPredicted RBP24.9■■□□□ 1.58
MEIS3-204ENST00000558555 CXCR5P32302 372 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 GBP1P32455 592 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 DEUP1Q05D60 604 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 POLNQ7Z5Q5 900 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 RBM23Q86U06 439 aaKnown RBP24.9■■□□□ 1.58
MEIS3-204ENST00000558555 SLC22A17Q8WUG5 538 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 OLA1Q9NTK5 396 aaKnown RBP24.9■■□□□ 1.58
MEIS3-204ENST00000558555 TRPM5Q9NZQ8 1165 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 PCSK1NQ9UHG2 260 aa24.9■■□□□ 1.58
MEIS3-204ENST00000558555 PER2O15055 1255 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 F9P00740 461 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 RDXP35241 583 aaKnown RBP24.89■■□□□ 1.58
MEIS3-204ENST00000558555 PPP3CCP48454 512 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 MARCKSL1P49006 195 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 PGFP49763 221 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 PEX5P50542 639 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 HDAC4P56524 1084 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 ODF2Q5BJF6 829 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 SND1Q7KZF4 910 aaKnown RBP eCLIP24.89■■□□□ 1.58
MEIS3-204ENST00000558555 MRPL38Q96DV4 380 aaKnown RBP24.89■■□□□ 1.58
MEIS3-204ENST00000558555 ZWILCHQ9H900 591 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 DDIT4Q9NX09 232 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 DDX56Q9NY93 547 aaKnown RBP24.89■■□□□ 1.58
MEIS3-204ENST00000558555 CDC23Q9UJX2 597 aa24.89■■□□□ 1.58
MEIS3-204ENST00000558555 SYNJ2BP-COX16A0A087WUM0 186 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 CES2O00748 559 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 SRGAP2O75044 1071 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 TRUB2O95900 331 aaKnown RBP24.89■■□□□ 1.57
MEIS3-204ENST00000558555 ZDHHC11BP0C7U3 371 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 RARGP13631 454 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 TCF4P15884 667 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 EPCAMP16422 314 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 SLC25A11Q02978 314 aaKnown RBP24.89■■□□□ 1.57
MEIS3-204ENST00000558555 NME3Q13232 169 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 DQX1Q8TE96 717 aaKnown RBP24.89■■□□□ 1.57
MEIS3-204ENST00000558555 ALG3Q92685 438 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 PGAP3Q96FM1 320 aaPredicted RBP24.89■■□□□ 1.57
MEIS3-204ENST00000558555 CDK5RAP1Q96SZ6 601 aaKnown RBP24.89■■□□□ 1.57
MEIS3-204ENST00000558555 CARD9Q9H257 536 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 OSER1Q9NX31 292 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 COX16Q9P0S2 106 aa24.89■■□□□ 1.57
MEIS3-204ENST00000558555 VCANP13611 3396 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 SPTBN5Q9NRC6 3674 aaKnown RBP24.88■■□□□ 1.57
MEIS3-204ENST00000558555 SPDYE4A6NLX3 237 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 ZMYND10O75800 440 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 ENDOD1O94919 500 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 FOSL2P15408 326 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 PITX1P78337 314 aaPredicted RBP24.88■■□□□ 1.57
MEIS3-204ENST00000558555 ADGRD2Q7Z7M1 963 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 TADA2BQ86TJ2 420 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 KATNAL2Q8IYT4 538 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 ADAM32Q8TC27 787 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 SMOC2Q9H3U7 446 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.88■■□□□ 1.57
MEIS3-204ENST00000558555 TMEM51Q9NW97 253 aa24.88■■□□□ 1.57
MEIS3-204ENST00000558555 RFXAPO00287 272 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 DUSP6Q16828 381 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 PABPC1LQ4VXU2 614 aaKnown RBP24.87■■□□□ 1.57
MEIS3-204ENST00000558555 RAB6CQ53S08 254 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 BOLA3Q53S33 107 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 OTUD1Q5VV17 481 aaPredicted RBP24.87■■□□□ 1.57
MEIS3-204ENST00000558555 MSANTD2Q6P1R3 559 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 BNIPLQ7Z465 357 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 TAC4Q86UU9 113 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 COG1Q8WTW3 980 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 CDCA3Q99618 268 aaPredicted RBP24.87■■□□□ 1.57
MEIS3-204ENST00000558555 ADAM33Q9BZ11 813 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 RAB6CQ9H0N0 254 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.87■■□□□ 1.57
MEIS3-204ENST00000558555 MRFAP1Q9Y605 127 aa24.87■■□□□ 1.57
MEIS3-204ENST00000558555 CEP104O60308 925 aa24.86■■□□□ 1.57
MEIS3-204ENST00000558555 HNRNPA1P09651 372 aaKnown RBP eCLIP24.86■■□□□ 1.57
MEIS3-204ENST00000558555 IL1R2P27930 398 aa24.86■■□□□ 1.57
MEIS3-204ENST00000558555 HOXA9P31269 272 aa24.86■■□□□ 1.57
MEIS3-204ENST00000558555 NRIP1P48552 1158 aa24.86■■□□□ 1.57
MEIS3-204ENST00000558555 C10orf120Q5SQS8 335 aa24.86■■□□□ 1.57
MEIS3-204ENST00000558555 SEL1L2Q5TEA6 688 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms