RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 SH3RF2Q8TEC5 729 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 NXPE3Q969Y0 559 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 E2F7Q96AV8 911 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 LRRC3BQ96PB8 259 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 DEF6Q9H4E7 631 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 POPDC2Q9HBU9 364 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 OLA1Q9NTK5 396 aaKnown RBP18.25■□□□□ 0.51
TPM1-214ENST00000558544 ASNSD1Q9NWL6 643 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 STRIP2Q9ULQ0 834 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 NAALADL1Q9UQQ1 740 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 TRIOO75962 3097 aa18.25■□□□□ 0.51
TPM1-214ENST00000558544 COL4A2P08572 1712 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 A0A087X0T9 212 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 LEFTY2O00292 366 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 CAPN9O14815 690 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 HSF2BPO75031 334 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 RTN2O75298 545 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 DAB1O75553 588 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 GLI1P08151 1106 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 FAM228BP0C875 321 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 GZMAP12544 262 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
TPM1-214ENST00000558544 C1QBPQ07021 282 aaKnown RBP18.24■□□□□ 0.51
TPM1-214ENST00000558544 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
TPM1-214ENST00000558544 PPP1R2P3Q6NXS1 205 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 MCOLN2Q8IZK6 566 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 BPIFB1Q8TDL5 484 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 KHSRPQ92945 711 aaKnown RBP eCLIP18.24■□□□□ 0.514e-9■□□□□ 9.5
TPM1-214ENST00000558544 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 METTL5Q9NRN9 209 aaKnown RBP18.24■□□□□ 0.51
TPM1-214ENST00000558544 GKN1Q9NS71 199 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 OBP2AQ9NY56 170 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 MARCH2Q9P0N8 246 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 IMPACTQ9P2X3 320 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 SFMBT1Q9UHJ3 866 aa18.24■□□□□ 0.51
TPM1-214ENST00000558544 SSU72P8A0A1W2PR75 194 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 PSMC3P17980 439 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 SCNN1AP37088 669 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 RNASE9P60153 205 aaKnown RBP18.23■□□□□ 0.51
TPM1-214ENST00000558544 GFPT1Q06210 699 aaPredicted RBP18.23■□□□□ 0.51
TPM1-214ENST00000558544 SYPL2Q5VXT5 272 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 MSANTD2Q6P1R3 559 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 MFSD6LQ8IWD5 586 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 DEFB106AQ8N104 65 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 SLC44A3Q8N4M1 653 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 DQX1Q8TE96 717 aaKnown RBP18.23■□□□□ 0.51
TPM1-214ENST00000558544 DEPDC1BQ8WUY9 529 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 SLC2A13Q96QE2 648 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 KLF16Q9BXK1 252 aaPredicted RBP18.23■□□□□ 0.51
TPM1-214ENST00000558544 SMOC2Q9H3U7 446 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
TPM1-214ENST00000558544 CFAP97Q9P2B7 532 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 WDR35Q9P2L0 1181 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 MUTYHQ9UIF7 546 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 BDP1A6H8Y1 2624 aa18.23■□□□□ 0.51
TPM1-214ENST00000558544 MYOFQ9NZM1 2061 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 SLC12A8A0AV02 714 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 GOLGA6L6A8MZA4 724 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 SCAMP3O14828 347 aaKnown RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 ATMINO43313 823 aaPredicted RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 MSI1O43347 362 aaKnown RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 NARSO43776 548 aaKnown RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 GJB6O95452 261 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 FTLP02792 175 aaPredicted RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 HMBSP08397 361 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 TCF3P15923 654 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 GSCP56915 257 aaPredicted RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 CDK17Q00537 523 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 TDGQ13569 410 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 MTF1Q14872 753 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 ASTE1Q2TB18 679 aaPredicted RBP18.22■□□□□ 0.51
TPM1-214ENST00000558544 DCAF6Q58WW2 860 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 CCDC122Q5T0U0 273 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 DDX42Q86XP3 938 aaKnown RBP eCLIP18.22■□□□□ 0.51
TPM1-214ENST00000558544 YAF2Q8IY57 180 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 ADAM32Q8TC27 787 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 WBP2Q969T9 261 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 PANX2Q96RD6 677 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 ISCUQ9H1K1 167 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 SORCS3Q9UPU3 1222 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 COL4A3Q01955 1670 aa18.22■□□□□ 0.51
TPM1-214ENST00000558544 AKR1B10O60218 316 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 RRM1P23921 792 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 GDI1P31150 447 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 PITX1P78337 314 aaPredicted RBP18.21■□□□□ 0.51
TPM1-214ENST00000558544 FCHO2Q0JRZ9 810 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 SLC18A3Q16572 532 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 DNAJC24Q6P3W2 148 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 ALKBH5Q6P6C2 394 aaKnown RBP18.21■□□□□ 0.51
TPM1-214ENST00000558544 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 C3orf20Q8ND61 904 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 ZNF653Q96CK0 615 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 SELENOOQ9BVL4 669 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 TRMT61BQ9BVS5 477 aaKnown RBP18.21■□□□□ 0.51
TPM1-214ENST00000558544 SPTLC3Q9NUV7 552 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms