RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 UBN1Q9NPG3 1134 aa5□□□□□ -1.61
PDE8A-209ENST00000558543 IFT80Q9P2H3 777 aaPredicted RBP5□□□□□ -1.61
PDE8A-209ENST00000558543 HESX1Q9UBX0 185 aa5□□□□□ -1.61
PDE8A-209ENST00000558543 SRP68Q9UHB9 627 aaKnown RBP5□□□□□ -1.61
PDE8A-209ENST00000558543 LINC00473A8K010 186 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 H7C4K7 107 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 EYA2O00167 538 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 MPPED1O15442 326 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 SNX2O60749 519 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 PROP1O75360 226 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 BAIAP3O94812 1187 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 SUN1O94901 812 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 KIF20AO95235 890 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 PPP3CBP16298 524 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 CNTFP26441 200 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 LRPAP1P30533 357 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 ATICP31939 592 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 PTDSS1P48651 473 aaKnown RBP4.99□□□□□ -1.61
PDE8A-209ENST00000558543 AARSP49588 968 aaKnown RBP eCLIP4.99□□□□□ -1.611e-6■■■□□ 15.5
PDE8A-209ENST00000558543 ACTR2P61160 394 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
PDE8A-209ENST00000558543 KRT17Q04695 432 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 TRPC3Q13507 836 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 DYRK1AQ13627 763 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 NPY5RQ15761 445 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 FAM110CQ1W6H9 321 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 TMTC4Q5T4D3 741 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 VPS53Q5VIR6 699 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 FCRL6Q6DN72 434 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 MZT2BQ6NZ67 158 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 LAYNQ6UX15 382 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 C4orf50Q6ZRC1 276 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 USP49Q70CQ1 688 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 RAB11FIP2Q7L804 512 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 TTC30AQ86WT1 665 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 TMTC1Q8IUR5 882 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 PDPRQ8NCN5 879 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 OR6Y1Q8NGX8 325 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 ASB12Q8WXK4 309 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 SNX19Q92543 992 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 LRIG1Q96JA1 1093 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 ZNF668Q96K58 619 aaPredicted RBP4.99□□□□□ -1.61
PDE8A-209ENST00000558543 MESP1Q9BRJ9 268 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 DDX23Q9BUQ8 820 aaKnown RBP4.99□□□□□ -1.61
PDE8A-209ENST00000558543 JMJD4Q9H9V9 463 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 SMC4Q9NTJ3 1288 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 DKK4Q9UBT3 224 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 AGAP1Q9UPQ3 857 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 LAS1LQ9Y4W2 734 aaKnown RBP4.99□□□□□ -1.61
PDE8A-209ENST00000558543 ENTPD2Q9Y5L3 495 aa4.99□□□□□ -1.61
PDE8A-209ENST00000558543 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 A0A0U1RQG5 324 aaPredicted RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CGB1A6NKQ9 187 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 POLRMTO00411 1230 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 PROM1O43490 865 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 RNASEH2AO75792 299 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 PIAS2O75928 621 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 NTSR2O95665 410 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 VIPP01282 170 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 ERBB2P04626 1255 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 POLBP06746 335 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CKMT1AP12532 417 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 ANXA11P50995 505 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 HNRNPMP52272 730 aaKnown RBP eCLIP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 TXNRD1Q16881 649 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CACHD1Q5VU97 1274 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 TAPT1Q6NXT6 567 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 FAM180BQ6P0A1 224 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 RASGRP3Q8IV61 690 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 SLC44A2Q8IWA5 706 aaPredicted RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CFAP52Q8N1V2 620 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 PCYOX1LQ8NBM8 494 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 WDR60Q8WVS4 1066 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 HERVK_113Q902F9 699 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 SARAFQ96BY9 339 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 GRAMD1AQ96CP6 724 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 MAELQ96JY0 434 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 TTYH3Q9C0H2 523 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 PABPC3Q9H361 631 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 PRDM8Q9NQV8 689 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 VPS45Q9NRW7 570 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 FEM1BQ9UK73 627 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 SCAF8Q9UPN6 1271 aaKnown RBP4.98□□□□□ -1.61
PDE8A-209ENST00000558543 RABGAP1Q9Y3P9 1069 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 DTNAQ9Y4J8 743 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 RAD54BQ9Y620 910 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CDY1Q9Y6F8 540 aa4.98□□□□□ -1.61
PDE8A-209ENST00000558543 CCDC195A0A1B0GUA6 201 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 CCDC151A5D8V7 595 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 A6NLC8 198 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 VWC2LB2RUY7 222 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 E9PLN8 166 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 TIMM44O43615 452 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 RGS10O43665 173 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 RRP9O43818 475 aaKnown RBP4.97□□□□□ -1.61
PDE8A-209ENST00000558543 USP1O94782 785 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 RASAL1O95294 804 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 RHOP08100 348 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
PDE8A-209ENST00000558543 PECAM1P16284 738 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms