RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 BHLHE22Q8NFJ8 381 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 GANQ9H2C0 597 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 CCNB1IP1Q9NPC3 277 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 CD274Q9NZQ7 290 aa12.11□□□□□ -0.47
CSPG4P12-201ENST00000558282 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ABATP80404 500 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 POU4F1Q01851 419 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 AUHQ13825 339 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 SPIDRQ14159 915 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF268Q14587 947 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CYP51A1Q16850 503 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 GPR107Q5VW38 600 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 SNX32Q86XE0 403 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 FAM13CQ8NE31 585 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 RGS18Q9NS28 235 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 EMC3Q9P0I2 261 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 STON1Q9Y6Q2 735 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 A0A1W2PRG6 482 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PTGES3LE9PB15 166 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 KLHL18O94889 574 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ANXA6P08133 673 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ABHD2P08910 425 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 MSH3P20585 1137 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 MMP13P45452 471 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CASP4P49662 377 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 BNIP1Q12981 228 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 NAB1Q13506 487 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 BTN2A1Q7KYR7 527 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 AGAP3Q96P47 875 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 FAM118BQ9BPY3 351 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 MRPL4Q9BYD3 311 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ROGDIQ9GZN7 287 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PCDHGA3Q9Y5H0 932 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CAMSAP1Q5T5Y3 1602 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 STX11O75558 287 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 MTRF1O75570 445 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PTPN7P35236 360 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 GRIK1P39086 918 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 GSSP48637 474 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 DGKDQ16760 1214 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 RBM20Q5T481 1227 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 NEK10Q6ZWH5 1172 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CENPIQ92674 756 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 KRCC1Q9NPI7 259 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 DUSP12Q9UNI6 340 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 GSTK1Q9Y2Q3 226 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 NDUFAF1Q9Y375 327 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 OVOS2A0A0G2JMS6 1433 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ASMTLO95671 621 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PON1P27169 355 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 RAB27AP51159 221 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CYP4Z1Q86W10 505 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 CITED4Q96RK1 184 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 LXNQ9BS40 222 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 ANAPC2Q9UJX6 822 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 RPS6KL1Q9Y6S9 549 aa12.1□□□□□ -0.47
CSPG4P12-201ENST00000558282 TGM2P21980 687 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 RRP1BQ14684 758 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 NFIL3Q16649 462 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 NRF1Q16656 503 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ZNF568Q3ZCX4 644 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 GLRA4Q5JXX5 417 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 CYP4Z2PQ8N1L4 340 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 POU5F2Q8N7G0 328 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 SYTL5Q8TDW5 730 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PTCD3Q96EY7 689 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 WDR41Q9HAD4 459 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ACOT9Q9Y305 439 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PCDHGC5Q9Y5F6 944 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 VPS4BO75351 444 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PGK2P07205 417 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 ITGA4P13612 1032 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TSHRP16473 764 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 IREB2P48200 963 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 MTMR1Q13613 665 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 PRKG1Q13976 671 aa12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 FASTKQ14296 549 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 NOP9Q86U38 636 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-201ENST00000558282 TTC30AQ86WT1 665 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms