RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OLFM2O95897 454 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 H2AFZP0C0S5 128 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 KRT3P12035 628 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 BMP1P13497 986 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 GALCP54803 685 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 GSCP56915 257 aaPredicted RBP22.23■■□□□ 1.15
CASC4-204ENST00000557945 SPA17Q15506 151 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 SYPL2Q5VXT5 272 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 KLHDC10Q6PID8 442 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 RAD9BQ6WBX8 426 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 H2AFVQ71UI9 128 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 BEND5Q7L4P6 421 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 ZNF276Q8N554 614 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 DOCK8Q8NF50 2099 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 THAP2Q9H0W7 228 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 ZFP14Q9HCL3 533 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 PARVAQ9NVD7 372 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.23■■□□□ 1.15
CASC4-204ENST00000557945 MARCH2Q9P0N8 246 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 LIMD1Q9UGP4 676 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 SFMBT1Q9UHJ3 866 aa22.23■■□□□ 1.15
CASC4-204ENST00000557945 EPN1Q9Y6I3 576 aaPredicted RBP22.23■■□□□ 1.15
CASC4-204ENST00000557945 ANKRD62A6NC57 917 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 IPO7O95373 1038 aaKnown RBP22.22■■□□□ 1.15
CASC4-204ENST00000557945 WEE1P30291 646 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 VIPR2P41587 438 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 SLC7A9P82251 487 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 PARM1Q6UWI2 310 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 MTSS1LQ765P7 747 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.15
CASC4-204ENST00000557945 LRRC8AQ8IWT6 810 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 ZDHHC14Q8IZN3 488 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 CCDC112Q8NEF3 446 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 USP13Q92995 863 aaPredicted RBP22.22■■□□□ 1.15
CASC4-204ENST00000557945 PDLIM2Q96JY6 352 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 PACSIN1Q9BY11 444 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 TMEM59LQ9UK28 342 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 ARHGAP26Q9UNA1 814 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 CCL26Q9Y258 94 aa22.22■■□□□ 1.15
CASC4-204ENST00000557945 SLC12A8A0AV02 714 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 SIGLEC16A6NMB1 481 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 EIF3CLB5ME19 914 aaKnown RBP22.21■■□□□ 1.15
CASC4-204ENST00000557945 ZNF263O14978 683 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 NDUFA10O95299 355 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 FLT3P36888 993 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 MATKP42679 507 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 GPC5P78333 572 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 ZP2Q05996 745 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 TANGO2Q6ICL3 276 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 PLEKHA7Q6IQ23 1121 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 MSANTD2Q6P1R3 559 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 DCUN1D2Q6PH85 259 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 CELF5Q8N6W0 485 aaKnown RBP22.21■■□□□ 1.15
CASC4-204ENST00000557945 EMC1Q8N766 993 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 JOSD2Q8TAC2 188 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 ADAM32Q8TC27 787 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 DQX1Q8TE96 717 aaKnown RBP22.21■■□□□ 1.15
CASC4-204ENST00000557945 CTNNBL1Q8WYA6 563 aaPredicted RBP22.21■■□□□ 1.15
CASC4-204ENST00000557945 MCEEQ96PE7 176 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 EIF3CQ99613 913 aaKnown RBP22.21■■□□□ 1.15
CASC4-204ENST00000557945 KXD1Q9BQD3 176 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 TRPV4Q9HBA0 871 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 GKN1Q9NS71 199 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 SCINQ9Y6U3 715 aa22.21■■□□□ 1.15
CASC4-204ENST00000557945 TCRBV5S1A1TA0A578 114 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 LOC730098B7Z3J9 87 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 NRDCO43847 1150 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 HMBSP08397 361 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 IRF1P10914 325 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 FCARP24071 287 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 NOS2P35228 1153 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 MAGEA1P43355 309 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 MAMLD1Q13495 774 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 C10orf76Q5T2E6 689 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 TAC4Q86UU9 113 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 SH3RF2Q8TEC5 729 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 FGF14Q92915 247 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 KLF16Q9BXK1 252 aaPredicted RBP22.2■■□□□ 1.14
CASC4-204ENST00000557945 FAM204AQ9H8W3 233 aa22.2■■□□□ 1.14
CASC4-204ENST00000557945 LUC7LQ9NQ29 371 aaKnown RBP22.2■■□□□ 1.14
CASC4-204ENST00000557945 C5orf42Q9H799 3197 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 HEPACAM2A8MVW5 462 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 LEFTY2O00292 366 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 MSI1O43347 362 aaKnown RBP22.19■■□□□ 1.14
CASC4-204ENST00000557945 LCA5LO95447 670 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 PDGFRAP16234 1089 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 RFC1P35251 1148 aaPredicted RBP22.19■■□□□ 1.14
CASC4-204ENST00000557945 HTR4Q13639 388 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 ARCQ7LC44 396 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 RXFP2Q8WXD0 754 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 ARHGEF26Q96DR7 871 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 DDX23Q9BUQ8 820 aaKnown RBP22.19■■□□□ 1.14
CASC4-204ENST00000557945 SMOC2Q9H3U7 446 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 KIF9Q9HAQ2 790 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 MRPL47Q9HD33 250 aaKnown RBP22.19■■□□□ 1.14
CASC4-204ENST00000557945 CFAP97Q9P2B7 532 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 STAP1Q9ULZ2 295 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 PCDHA13Q9Y5I0 950 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 NUMBLQ9Y6R0 609 aa22.19■■□□□ 1.14
CASC4-204ENST00000557945 SYNJ2BP-COX16A0A087WUM0 186 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms