RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 CLIC5Q9NZA1 410 aa12.03□□□□□ -0.48
LINC00648-204ENST00000557749 SLC8A2Q9UPR5 921 aa12.03□□□□□ -0.48
LINC00648-204ENST00000557749 WNT6Q9Y6F9 365 aa12.03□□□□□ -0.48
LINC00648-204ENST00000557749 R4GN57 208 aa12.03□□□□□ -0.48
LINC00648-204ENST00000557749 MYH10P35580 1976 aa12.03□□□□□ -0.48
LINC00648-204ENST00000557749 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
LINC00648-204ENST00000557749 TRIM49BA6NDI0 452 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 COCHO43405 550 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 LILRB5O75023 590 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 SETSIPP0DME0 302 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 TIMP2P16035 220 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CACNA2D1P54289 1103 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 BCAT1P54687 386 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 MARSP56192 900 aaKnown RBP12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CBWD6Q4V339 395 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CBWD3Q5JTY5 395 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CBWD5Q5RIA9 395 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 TTI2Q6NXR4 508 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 TXNDC11Q6PKC3 985 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 ASCL5Q7RTU5 278 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CCDC186Q7Z3E2 898 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 LONP2Q86WA8 852 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 C12orf29Q8N999 325 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 MLKLQ8NB16 471 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 ANKRD52Q8NB46 1076 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 TTC8Q8TAM2 541 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 GMIPQ9P107 970 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 CFAP97Q9P2B7 532 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 NCDNQ9UBB6 729 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 HMGXB4Q9UGU5 601 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 RWDD2AQ9UIY3 292 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 GMEB2Q9UKD1 530 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 ZNF510Q9Y2H8 683 aa12.02□□□□□ -0.49
LINC00648-204ENST00000557749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00648-204ENST00000557749 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.49
LINC00648-204ENST00000557749 PAEPP09466 180 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 VDRP11473 427 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ARSAP15289 507 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ACO1P21399 889 aaKnown RBP12.01□□□□□ -0.49
LINC00648-204ENST00000557749 SDHBP21912 280 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 PLA2G4AP47712 749 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 KIF11P52732 1056 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
LINC00648-204ENST00000557749 COG7P83436 770 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 GCNT1Q02742 428 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 GAD2Q05329 585 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ENOSF1Q7L5Y1 443 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 TRMT11Q7Z4G4 463 aaKnown RBP12.01□□□□□ -0.49
LINC00648-204ENST00000557749 C11orf74Q86VG3 221 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 FAM114A1Q8IWE2 563 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 SCAMP5Q8TAC9 235 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 WHAMMQ8TF30 809 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 SEMA4DQ92854 862 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 DCLK3Q9C098 648 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 RNF38Q9H0F5 515 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 OLA1Q9NTK5 396 aaKnown RBP12.01□□□□□ -0.49
LINC00648-204ENST00000557749 TMEM30AQ9NV96 361 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 SMPD4Q9NXE4 827 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 CHORDC1Q9UHD1 332 aaPredicted RBP12.01□□□□□ -0.49
LINC00648-204ENST00000557749 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 STRIP2Q9ULQ0 834 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 CTNND2Q9UQB3 1225 aa12.01□□□□□ -0.49
LINC00648-204ENST00000557749 ZFHX2Q9C0A1 2572 aaPredicted RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ERVH48-1M5A8F1 160 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 XPO1O14980 1071 aaKnown RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 AFPP02771 609 aaKnown RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 APODP05090 189 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ADH5P11766 374 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 GALK1P51570 392 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 RAD23BP54727 409 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 SATB1Q01826 763 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 BST2Q10589 180 aaKnown RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 ORC1Q13415 861 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 DHCR24Q15392 516 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 ZNF394Q53GI3 561 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 PPP1R26Q5T8A7 1209 aaPredicted RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 LAIR1Q6GTX8 287 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 SYT13Q7L8C5 426 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 CCDC116Q8IYX3 515 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ADGRG2Q8IZP9 1017 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 SLC4A11Q8NBS3 891 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ERCC4Q92889 916 aaPredicted RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 GBP4Q96PP9 640 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 TWNKQ96RR1 684 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 TRIM62Q9BVG3 475 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ZMYND15Q9H091 742 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 ZFAND3Q9H8U3 227 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 LRRC4Q9HBW1 653 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
LINC00648-204ENST00000557749 WDR35Q9P2L0 1181 aa12□□□□□ -0.49
LINC00648-204ENST00000557749 NAGPAQ9UK23 515 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms