RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 GRAP2O75791 330 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 NCAM1P13591 858 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ADKP55263 362 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ZXDAP98168 799 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC6A3Q01959 620 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 WDR59Q6PJI9 974 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 MON1BQ7L1V2 547 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC26A9Q7LBE3 791 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 DDX42Q86XP3 938 aaKnown RBP eCLIP15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ZDHHC17Q8IUH5 632 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 UBALD2Q8IYN6 164 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 OR8K1Q8NGG5 319 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 BRD9Q9H8M2 597 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 POPDC2Q9HBU9 364 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC2A4RGQ9NR83 387 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ABHD10Q9NUJ1 306 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ASNSD1Q9NWL6 643 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 TAS2R14Q9NYV8 317 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 ARHGAP20Q9P2F6 1191 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 SFMBT1Q9UHJ3 866 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 NAALADL1Q9UQQ1 740 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 BZW2Q9Y6E2 419 aaKnown RBP15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 WNT6Q9Y6F9 365 aa15.53■□□□□ 0.08
VIPAS39-210ENST00000557466 TTC28Q96AY4 2481 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 TMCO5BA8MYB1 307 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 ARNTLO00327 626 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 ZNF263O14978 683 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 CHADO15335 359 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 MSI1O43347 362 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 HSF2BPO75031 334 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 DAB1O75553 588 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 GLI1P08151 1106 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 SCNN1AP37088 669 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 YWHAZP63104 245 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 EFHC1Q5JVL4 640 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 FAM102AQ5T9C2 384 aaPredicted RBP15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 SYPL2Q5VXT5 272 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 TRIM68Q6AZZ1 485 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 ACAD10Q6JQN1 1059 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 BEND5Q7L4P6 421 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 CNGA4Q8IV77 575 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 DEFB106AQ8N104 65 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 DQX1Q8TE96 717 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC2A13Q96QE2 648 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 TRIM62Q9BVG3 475 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 THG1LQ9NWX6 298 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 ADAM22Q9P0K1 906 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 SH3BP1Q9Y3L3 701 aa15.52■□□□□ 0.08
VIPAS39-210ENST00000557466 SLC12A8A0AV02 714 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 AKR1B15C9JRZ8 316 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 PI4K2BG5E9Z4 385 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 CAPN9O14815 690 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 GREM1O60565 184 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 STC2O76061 302 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 ADCY5O95622 1261 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 CALB1P05937 261 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 HMBSP08397 361 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 ARSAP15289 507 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 CDC25BP30305 580 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 IFNAR2P48551 515 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 GSCP56915 257 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 PITX1P78337 314 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 IER5LQ5T953 404 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 CC2D1AQ6P1N0 951 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 PHLDB2Q86SQ0 1253 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 TAC4Q86UU9 113 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 DNAAF5Q86Y56 855 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 TC2NQ8N9U0 490 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 OSCP1Q8WVF1 389 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 EDAQ92838 391 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 DNASE1L2Q92874 299 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 IRF7Q92985 503 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 FAM83CQ9BQN1 747 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 HPS4Q9NQG7 708 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 METTL5Q9NRN9 209 aaKnown RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 DUS2Q9NX74 493 aaKnown RBP15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 MIA3Q5JRA6 1907 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 TECTAO75443 2155 aa15.51■□□□□ 0.07
VIPAS39-210ENST00000557466 KIAA1549LQ6ZVL6 1849 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 E2F8A0AVK6 867 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 GJB6O95452 261 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 ALADP13716 330 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 EIF4A3P38919 411 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 COG7P83436 770 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 TNK2Q07912 1038 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 EML3Q32P44 896 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 DCAF6Q58WW2 860 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 TRNP1Q6NT89 227 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 BBS7Q8IWZ6 715 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 DRC7Q8IY82 874 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 MCOLN2Q8IZK6 566 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 ADAM32Q8TC27 787 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 EBF3Q9H4W6 596 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 EPHX3Q9H6B9 360 aa15.5■□□□□ 0.07
VIPAS39-210ENST00000557466 WDR35Q9P2L0 1181 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms